Factsheet for Bra004442.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014387.1-P	Field mustard	cytosol	98.83	98.83
AT3G62870.1	Thale cress	cytosol	94.92	94.92
CDX80121	Canola	cytosol	94.53	92.02
Bra000455.1-P	Field mustard	cytosol	95.7	90.07
KRH29218	Soybean	endoplasmic reticulum, nucleus	85.94	84.94
KRH24214	Soybean	nucleus	85.94	84.94
Zm00001d006100_P001	Maize	plasma membrane	85.55	84.88
TraesCS7D01G262800.2	Wheat	cytosol	85.55	84.88
TraesCS7A01G261600.1	Wheat	cytosol, plastid	85.55	84.88
KRH31699	Soybean	cytosol, nucleus	85.94	84.62
Os08t0326400-01	Rice	cytosol	85.16	84.5
Zm00001d021061_P001	Maize	cytosol, mitochondrion, plasma membrane	85.16	84.5
TraesCS7B01G159700.1	Wheat	cytosol	85.16	84.5
Os09t0507800-01	Rice	nucleus, plasma membrane	85.16	84.5
KRH69083	Soybean	nucleus	85.55	84.23
Zm00001d031640_P001	Maize	mitochondrion	84.38	84.05
EER99158	Sorghum	cytosol	84.38	83.72
TraesCS5D01G296200.1	Wheat	cytosol	84.38	83.4
TraesCS5B01G287900.1	Wheat	cytosol	84.38	83.4
TraesCS5A01G288400.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	84.38	83.4
Os01t0924800-00	Rice	cytosol, golgi	50.78	82.28
HORVU7Hr1G054670.5	Barley	cytosol	85.16	80.74
GSMUA_Achr10P...	Banana	cytosol	83.2	79.78
PGSC0003DMT400057989	Potato	cytosol	79.69	79.07
Solyc01g097760.2.1	Tomato	nucleus	79.3	78.68
Solyc06g064470.2.1	Tomato	nucleus	78.91	78.29
PGSC0003DMT400008912	Potato	cytosol, plastid	77.73	78.04
Solyc06g064460.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	78.52	77.91
Solyc06g050120.2.1	Tomato	nucleus	78.52	77.61
KRH15988	Soybean	cytosol	23.44	76.92
GSMUA_Achr11P...	Banana	cytosol	83.2	76.9
HORVU5Hr1G076700.2	Barley	cytosol	84.77	76.41
GSMUA_Achr3P03600_001	Banana	cytosol	81.64	72.82
Solyc10g018810.1.1	Tomato	cytosol	21.88	72.73
PGSC0003DMT400015879	Potato	cytosol	41.41	72.11
PGSC0003DMT400083237	Potato	cytosol	69.53	71.49
VIT_14s0083g00970.t01	Wine grape	plastid	83.98	71.43
Solyc01g020290.1.1	Tomato	cytosol	14.45	68.52
KXG35979	Sorghum	cytosol, mitochondrion	84.38	65.26
EES03046	Sorghum	cytosol	17.19	64.71
KXG25835	Sorghum	cytosol	17.19	64.71
Solyc11g042870.1.1	Tomato	cytosol	21.88	63.64
GSMUA_Achr6P21550_001	Banana	cytosol	82.81	61.1
Bra013849.1-P	Field mustard	cytosol	92.97	58.91
GSMUA_Achr6P14640_001	Banana	cytosol	84.38	56.84
Bra003512.1-P	Field mustard	cytosol	89.06	56.3
Bra019201.1-P	Field mustard	cytosol	87.89	53.44
TraesCS4D01G148500.2	Wheat	cytosol	17.58	30.61

Protein Annotations

MapMan:17.1.2.1.6	Gene3D:3.30.1330.210	EnsemblPlantsGene:Bra004442	EnsemblPlants:Bra004442.1	EnsemblPlants:Bra004442.1-P	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005829	GO:GO:0005840
GO:GO:0008150	GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0022625
GO:GO:0030529	GO:GO:0042254	GO:GO:0042788	GO:GO:1990904	InterPro:IPR029064	InterPro:IPR038524
InterPro:L30e-like	UniProt:M4CJQ8	PFAM:PF01248	PRINTS:PR00881	PRINTS:PR00882	ScanProsite:PS01082
PANTHER:PTHR23105	PANTHER:PTHR23105:SF70	InterPro:Ribosomal_L7A/L8	InterPro:Ribosomal_L7A/L8_sf	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	InterPro:Ribosomal_L7Ae/L8/Nhp2
InterPro:Ribosomal_L7Ae_CS	SUPFAM:SSF55315	UniParc:UPI0002547FD9	SEG:seg	:	:

Description

AT3G62870 (E=1e-113) | 60S ribosomal protein L7A (RPL7aB)

Coordinates

chrA05:-:141815..143071

Molecular Weight (calculated)

29189.3 Da

IEP (calculated)

10.867

GRAVY (calculated)

-0.596

Length

256 amino acids

Sequence
(BLAST)

001: MAPKRGVKVA AKKKTEKVTN PLFERRPKQF GIGGALPPKK DLTRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATQLFKVL MKYRPEDKAA
101: KKDRLLKKAQ AEAEGKPSES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GTVVHQKTAA CLCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVLAKE AAQRMN

Best Arabidopsis Sequence Match ( AT2G47610.1 )
(BLAST)

001: MAPKKGVKVA AKKKTAEKVS NPLFERRPKQ FGIGGALPPK KDLSRYIKWP KSIRLQRQKR ILKQRLKVPP ALNQFTKTLD KNLATSLFKV LLKYRPEDKA
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN

Arabidopsis Description

RPL7AA60S ribosomal protein L7a-1 [Source:UniProtKB/Swiss-Prot;Acc:P49692]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.