Factsheet for Bra000455.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023148.1-P
Bra039871.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47610.1	Bra023148.1-P	AT1G30860.1	21798944
AT2G47610.1	Bra039871.1-P	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83325	Canola	cytosol	100.0	100.0
Bra014387.1-P	Field mustard	cytosol	90.44	96.09
AT2G47610.1	Thale cress	cytosol	90.44	95.72
Bra004442.1-P	Field mustard	cytosol	90.07	95.7
KRH24214	Soybean	nucleus	80.15	84.17
KRH29218	Soybean	endoplasmic reticulum, nucleus	80.15	84.17
Zm00001d006100_P001	Maize	plasma membrane	79.78	84.11
TraesCS7A01G261600.1	Wheat	cytosol, plastid	79.78	84.11
Zm00001d021061_P001	Maize	cytosol, mitochondrion, plasma membrane	79.41	83.72
KRH31699	Soybean	cytosol, nucleus	79.78	83.46
TraesCS7D01G262800.2	Wheat	cytosol	79.04	83.33
KRH69083	Soybean	nucleus	79.41	83.08
EER99158	Sorghum	cytosol	78.68	82.95
TraesCS7B01G159700.1	Wheat	cytosol	78.68	82.95
Os09t0507800-01	Rice	nucleus, plasma membrane	78.68	82.95
Os08t0326400-01	Rice	cytosol	78.68	82.95
Zm00001d031640_P001	Maize	mitochondrion	78.31	82.88
TraesCS5D01G296200.1	Wheat	cytosol	78.68	82.63
TraesCS5B01G287900.1	Wheat	cytosol	78.68	82.63
TraesCS5A01G288400.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	78.68	82.63
Os01t0924800-00	Rice	cytosol, golgi	47.06	81.01
Solyc06g064470.2.1	Tomato	nucleus	75.74	79.84
PGSC0003DMT400057989	Potato	cytosol	75.74	79.84
GSMUA_Achr10P...	Banana	cytosol	78.31	79.78
HORVU7Hr1G054670.5	Barley	cytosol	79.04	79.63
Solyc06g064460.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	75.37	79.46
Solyc01g097760.2.1	Tomato	nucleus	75.37	79.46
PGSC0003DMT400008912	Potato	cytosol, plastid	73.9	78.82
Solyc06g050120.2.1	Tomato	nucleus	75.0	78.76
GSMUA_Achr11P...	Banana	cytosol	77.94	76.53
HORVU5Hr1G076700.2	Barley	cytosol	79.04	75.7
PGSC0003DMT400015879	Potato	cytosol	39.71	73.47
PGSC0003DMT400083237	Potato	cytosol	66.91	73.09
GSMUA_Achr3P03600_001	Banana	cytosol	76.84	72.82
Solyc10g018810.1.1	Tomato	cytosol	20.22	71.43
VIT_14s0083g00970.t01	Wine grape	plastid	78.68	71.1
KRH15988	Soybean	cytosol	20.22	70.51
Solyc01g020290.1.1	Tomato	cytosol	13.97	70.37
KXG35979	Sorghum	cytosol, mitochondrion	79.04	64.95
Solyc11g042870.1.1	Tomato	cytosol	20.22	62.5
KXG25835	Sorghum	cytosol	15.44	61.76
EES03046	Sorghum	cytosol	15.44	61.76
GSMUA_Achr6P21550_001	Banana	cytosol	77.21	60.52
Bra013849.1-P	Field mustard	cytosol	88.24	59.41
GSMUA_Achr6P14640_001	Banana	cytosol	78.68	56.32
Bra019201.1-P	Field mustard	cytosol	85.29	55.11
Bra003512.1-P	Field mustard	cytosol	80.88	54.32
TraesCS4D01G148500.2	Wheat	cytosol	17.28	31.97

Protein Annotations

MapMan:17.1.2.1.6	Gene3D:3.30.1330.210	EnsemblPlantsGene:Bra000455	EnsemblPlants:Bra000455.1	EnsemblPlants:Bra000455.1-P	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005829	GO:GO:0005840
GO:GO:0008150	GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0022625
GO:GO:0022626	GO:GO:0030529	GO:GO:0042254	GO:GO:0042788	GO:GO:1990904	InterPro:IPR029064
InterPro:IPR038524	InterPro:L30e-like	UniProt:M4C8C7	PFAM:PF01248	PRINTS:PR00881	PRINTS:PR00882
ScanProsite:PS01082	PANTHER:PTHR23105	PANTHER:PTHR23105:SF70	InterPro:Ribosomal_L7A/L8	InterPro:Ribosomal_L7A/L8_sf	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45
InterPro:Ribosomal_L7Ae/L8/Nhp2	InterPro:Ribosomal_L7Ae_CS	SUPFAM:SSF55315	UniParc:UPI000253FF35	SEG:seg	:

Description

AT2G47610 (E=3e-122) | 60S ribosomal protein L7A (RPL7aA)

Coordinates

chrA03:+:11198408..11199571

Molecular Weight (calculated)

30815.3 Da

IEP (calculated)

10.780

GRAVY (calculated)

-0.476

Length

272 amino acids

Sequence
(BLAST)

001: MVELSLHSFP FSLCISLAPK KGVKVAAKKK TDKVTNPLFE RRPKQFGIGG ALPPKKDLTR YIKWPKSIRL QRQKRILKQR LKVPPALNQF TKTLDKNLAT
101: SLFKILLKYR PEDKAAKKER LVKKAQAEAE GKPSESKKPI VVKYGLNHVT YLIEQNKAQL VVIAHDVDPI ELVVWLPALC RKMEVPYCIV KGKSRLGAVV
201: HQKTAACLCL TTVKNEDKLE FSKVLEAIKA NFNDKYEEYR KKWGGGIMGS KSQAKTKAKE RVLAKEAAQR NN

Best Arabidopsis Sequence Match ( AT2G47610.1 )
(BLAST)

001: MAPKKGVKVA AKKKTAEKVS NPLFERRPKQ FGIGGALPPK KDLSRYIKWP KSIRLQRQKR ILKQRLKVPP ALNQFTKTLD KNLATSLFKV LLKYRPEDKA
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN

Arabidopsis Description

RPL7AA60S ribosomal protein L7a-1 [Source:UniProtKB/Swiss-Prot;Acc:P49692]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.