CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER99396

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47610.1	EER99396	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006100_P001	Maize	plasma membrane	98.45	98.45
Zm00001d021061_P001	Maize	cytosol, mitochondrion, plasma membrane	98.06	98.06
Os09t0507800-01	Rice	nucleus, plasma membrane	97.67	97.67
Os08t0326400-01	Rice	cytosol	97.67	97.67
TraesCS5D01G296200.1	Wheat	cytosol	95.74	95.37
TraesCS5B01G287900.1	Wheat	cytosol	95.74	95.37
TraesCS5A01G288400.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	95.74	95.37
GSMUA_Achr10P...	Banana	cytosol	93.02	89.89
KRH29218	Soybean	endoplasmic reticulum, nucleus	89.53	89.19
KRH24214	Soybean	nucleus	89.15	88.8
GSMUA_Achr11P...	Banana	cytosol	93.8	87.36
HORVU5Hr1G076700.2	Barley	cytosol	96.12	87.32
KRH31699	Soybean	cytosol, nucleus	87.98	87.31
KRH69083	Soybean	nucleus	87.98	87.31
AT2G47610.1	Thale cress	cytosol	84.11	84.44
Bra004442.1-P	Field mustard	cytosol	83.72	84.38
Bra014387.1-P	Field mustard	cytosol	83.72	84.38
AT3G62870.1	Thale cress	cytosol	83.33	83.98
GSMUA_Achr3P03600_001	Banana	cytosol	92.64	83.28
CDX93955	Canola	cytosol	82.95	81.37
CDX89154	Canola	cytosol	83.72	80.6
KRH15988	Soybean	cytosol	24.03	79.49
PGSC0003DMT400008912	Potato	cytosol, plastid	78.29	79.22
CDY55535	Canola	extracellular	29.07	78.95
Solyc01g097760.2.1	Tomato	nucleus	78.68	78.68
PGSC0003DMT400057989	Potato	cytosol	78.68	78.68
Bra000455.1-P	Field mustard	cytosol	82.95	78.68
CDX83325	Canola	cytosol	82.95	78.68
CDY66035	Canola	cytosol	79.07	78.46
Solyc06g064460.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	78.29	78.29
Solyc06g064470.2.1	Tomato	nucleus	78.29	78.29
KXG35979	Sorghum	cytosol, mitochondrion	100.0	77.95
Solyc06g050120.2.1	Tomato	nucleus	77.91	77.61
CDX80121	Canola	cytosol	79.07	77.57
VIT_17s0000g00980.t01	Wine grape	cytosol	89.53	77.0
VIT_14s0068g01640.t01	Wine grape	mitochondrion	89.53	77.0
VIT_14s0083g00970.t01	Wine grape	plastid	89.53	76.74
CDX95727	Canola	cytosol	82.95	76.7
CDX76668	Canola	extracellular	82.95	75.89
PGSC0003DMT400083237	Potato	cytosol	70.93	73.49
PGSC0003DMT400015879	Potato	cytosol	41.47	72.79
Solyc10g018810.1.1	Tomato	cytosol	21.71	72.73
CDY11453	Canola	cytosol	83.33	72.15
EES03046	Sorghum	cytosol	18.99	72.06
KXG25835	Sorghum	cytosol	18.6	70.59
GSMUA_Achr6P21550_001	Banana	cytosol	93.41	69.45
GSMUA_Achr6P14640_001	Banana	cytosol	94.19	63.95
CDX92144	Canola	extracellular	78.29	62.35
CDY03061	Canola	extracellular	24.81	59.81
Solyc01g020290.1.1	Tomato	cytosol	12.02	57.41
Solyc11g042870.1.1	Tomato	cytosol	19.38	56.82
CDY25121	Canola	cytosol	81.78	54.52
CDY34328	Canola	nucleus	84.5	53.96
Bra013849.1-P	Field mustard	cytosol	83.72	53.47
CDY03403	Canola	cytosol	83.72	52.81
Bra003512.1-P	Field mustard	cytosol	76.74	48.89
CDX92662	Canola	cytosol	76.74	47.83
Bra019201.1-P	Field mustard	cytosol	77.91	47.74
CDY11043	Canola	cytosol	77.91	47.74
CDY08962	Canola	endoplasmic reticulum, extracellular	19.77	47.66
CDX67906	Canola	extracellular	80.62	46.95
CDY33717	Canola	cytosol	32.17	41.71
TraesCS4D01G148500.2	Wheat	cytosol	22.48	39.46
CDX93958	Canola	cytosol	10.08	25.0
CDY55536	Canola	cytosol	10.08	25.0
CDX89151	Canola	cytosol	10.08	24.76
CDY25120	Canola	cytosol	7.36	15.2

Protein Annotations

MapMan:17.1.2.1.6	Gene3D:3.30.1330.210	EntrezGene:8054789	EntrezGene:8054791	UniProt:C5X592	EnsemblPlants:EER99158
ProteinID:EER99158	ProteinID:EER99158.1	ProteinID:EER99160.1	GO:GO:0000470	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006139	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	GO:GO:0030529	GO:GO:0042254
GO:GO:1990904	InterPro:IPR029064	InterPro:IPR038524	InterPro:L30e-like	PFAM:PF01248	PRINTS:PR00881
PRINTS:PR00882	ScanProsite:PS01082	PANTHER:PTHR23105	PANTHER:PTHR23105:SF70	InterPro:Ribosomal_L7A/L8	InterPro:Ribosomal_L7A/L8_sf
InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	InterPro:Ribosomal_L7Ae/L8/Nhp2	InterPro:Ribosomal_L7Ae_CS	EnsemblPlantsGene:SORBI_3002G259000	SUPFAM:SSF55315	unigene:Sbi.20327
unigene:Sbi.3504	UniParc:UPI0001A83C0A	RefSeq:XP_002462637.1	RefSeq:XP_002462639.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:64446692..64449217

Molecular Weight (calculated)

29360.7 Da

IEP (calculated)

11.088

GRAVY (calculated)

-0.507

Length

258 amino acids

Sequence
(BLAST)

001: MAPKRGGRAP VPAKKKTDKV VNPLFEKRPK QFGIGGALPP KKDLHRFVKW PKVVRIQRQR RILKQRLKVP PALNQFTRTL DKNLATNLFK MLLKYRPEDK
101: AAKKERLLKR AQAETEGKTV EAKKPIVVKY GLNHVTYLIE QNKAQLVVIA HDVDPIELVV WLPALCRKME VPYCIVKGKA RLGSIVHKKT ASVLCLTTVK
201: NEDKLEFSKI LEAIKANFND KFDEVRKKWG GGIMGSKSQA KTKAREKLIA KEAAQRMT

Best Arabidopsis Sequence Match ( AT3G62870.1 )
(BLAST)

001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN

Arabidopsis Description

RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.