Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99158 | Sorghum | cytosol | 77.0 | 89.53 |
| Zm00001d006100_P001 | Maize | plasma membrane | 77.0 | 89.53 |
| Os09t0507800-01 | Rice | nucleus, plasma membrane | 77.0 | 89.53 |
| Os08t0326400-01 | Rice | cytosol | 77.0 | 89.53 |
| Os01t0924800-00 | Rice | cytosol, golgi | 47.0 | 89.24 |
| Zm00001d021061_P001 | Maize | cytosol, mitochondrion, plasma membrane | 76.67 | 89.15 |
| Zm00001d031640_P001 | Maize | mitochondrion | 76.33 | 89.11 |
| GSMUA_Achr10P... | Banana | cytosol | 79.0 | 88.76 |
| TraesCS7D01G262800.2 | Wheat | cytosol | 76.0 | 88.37 |
| TraesCS7A01G261600.1 | Wheat | cytosol, plastid | 76.0 | 88.37 |
| TraesCS5D01G296200.1 | Wheat | cytosol | 76.0 | 88.03 |
| TraesCS5B01G287900.1 | Wheat | cytosol | 76.0 | 88.03 |
| TraesCS5A01G288400.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 76.0 | 88.03 |
| TraesCS7B01G159700.1 | Wheat | cytosol | 75.67 | 87.98 |
| GSMUA_Achr11P... | Banana | cytosol | 79.0 | 85.56 |
| HORVU7Hr1G054670.5 | Barley | cytosol | 75.67 | 84.07 |
| HORVU5Hr1G076700.2 | Barley | cytosol | 77.33 | 81.69 |
| GSMUA_Achr3P03600_001 | Banana | cytosol | 77.67 | 81.18 |
| VIT_14s0068g01640.t01 | Wine grape | mitochondrion | 80.67 | 80.67 |
| VIT_14s0083g00970.t01 | Wine grape | plastid | 79.33 | 79.07 |
| KXG35979 | Sorghum | cytosol, mitochondrion | 77.33 | 70.09 |
| GSMUA_Achr6P21550_001 | Banana | cytosol | 78.67 | 68.01 |
| EES03046 | Sorghum | cytosol | 15.33 | 67.65 |
| KXG25835 | Sorghum | cytosol | 15.0 | 66.18 |
| GSMUA_Achr6P14640_001 | Banana | cytosol | 80.0 | 63.16 |
| TraesCS4D01G148500.2 | Wheat | cytosol | 18.0 | 36.73 |
Protein Annotations
| EntrezGene:100255902 | wikigene:100255902 | MapMan:17.1.2.1.6 | Gene3D:3.30.1330.210 | ProteinID:CBI15705 | ProteinID:CBI15705.3 |
| ncoils:Coil | UniProt:D7SH25 | EMBL:FN594950 | GO:GO:0000470 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 | GO:GO:0030529 | GO:GO:0042254 |
| GO:GO:1990904 | InterPro:IPR029064 | InterPro:IPR038524 | InterPro:L30e-like | EntrezGene:LOC100255902 | wikigene:LOC100255902 |
| PFAM:PF01248 | PRINTS:PR00881 | PRINTS:PR00882 | ScanProsite:PS01082 | PANTHER:PTHR23105 | PANTHER:PTHR23105:SF70 |
| InterPro:Ribosomal_L7A/L8 | InterPro:Ribosomal_L7A/L8_sf | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 | InterPro:Ribosomal_L7Ae/L8/Nhp2 | InterPro:Ribosomal_L7Ae_CS | SUPFAM:SSF55315 |
| TIGR:TC56522 | TIGR:TC67109 | UniParc:UPI0001BE0F29 | ArrayExpress:VIT_17s0000g00980 | EnsemblPlantsGene:VIT_17s0000g00980 | EnsemblPlants:VIT_17s0000g00980.t01 |
| unigene:Vvi.6266 | RefSeq:XP_002284139 | RefSeq:XP_002284139.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr17:+:711458..715966
Molecular Weight (calculated)
33885.0 Da
IEP (calculated)
10.976
GRAVY (calculated)
-0.536
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKSELLNKS TSNFSRGQWT GPGAARVYFA ASEVGRSTAH SEMAPKKGGK VLAQTKKKPE KVVNPLFEKR PKQFGIGGAL PPKRDLHRFV KWPHVVRIQR
101: KRRILKQRLK VPPALNQFTK TLDKNLATSL FKMLLKYRPE DKAAKKERLL KRAQSEAEGK TIEVKKPIVV KYGLNHVTYL IEQNKAQLVV IAHDVDPIEL
201: VVWLPALCRK MEIPYCIVKG KSRLGAIVHK KTAAVLCLTT VKNEDKLEFS KILEAIKANF NDKYDENRKK WGGGIMGSKS QAKTKAKEKL LAKEAAQRMS
101: KRRILKQRLK VPPALNQFTK TLDKNLATSL FKMLLKYRPE DKAAKKERLL KRAQSEAEGK TIEVKKPIVV KYGLNHVTYL IEQNKAQLVV IAHDVDPIEL
201: VVWLPALCRK MEIPYCIVKG KSRLGAIVHK KTAAVLCLTT VKNEDKLEFS KILEAIKANF NDKYDENRKK WGGGIMGSKS QAKTKAKEKL LAKEAAQRMS
001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN
Arabidopsis Description
RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.