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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G229600.2
TraesCS2B01G251300.1
TraesCS2D01G233500.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G47610.1 TraesCS2A01G229600.2 AT1G30860.1 21798944
AT2G47610.1 TraesCS2B01G251300.1 AT1G30860.1 21798944
AT2G47610.1 TraesCS2D01G233500.1 AT1G30860.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G296200.1 Wheat cytosol 100.0 100.0
TraesCS5A01G288400.1 Wheat cytosol, golgi, nucleus, plastid, unclear 100.0 100.0
TraesCS7B01G159700.1 Wheat cytosol 98.07 98.45
Os09t0507800-01 Rice nucleus, plasma membrane 95.37 95.74
Os08t0326400-01 Rice cytosol 95.37 95.74
EER99158 Sorghum cytosol 95.37 95.74
Zm00001d006100_P001 Maize plasma membrane 94.21 94.57
Zm00001d021061_P001 Maize cytosol, mitochondrion, plasma membrane 93.82 94.19
HORVU5Hr1G076700.2 Barley cytosol 99.61 90.85
GSMUA_Achr10P... Banana cytosol 90.35 87.64
KRH24214 Soybean nucleus 87.26 87.26
KRH29218 Soybean endoplasmic reticulum, nucleus 86.87 86.87
KRH69083 Soybean nucleus 86.1 85.77
KRH31699 Soybean cytosol, nucleus 86.1 85.77
AT2G47610.1 Thale cress cytosol 84.56 85.21
GSMUA_Achr11P... Banana cytosol 91.12 85.2
AT3G62870.1 Thale cress cytosol 83.4 84.38
Bra014387.1-P Field mustard cytosol 83.4 84.38
Bra004442.1-P Field mustard cytosol 83.4 84.38
GSMUA_Achr3P03600_001 Banana cytosol 91.89 82.93
CDX93955 Canola cytosol 82.63 81.37
CDY55535 Canola extracellular 29.73 81.05
CDX89154 Canola cytosol 83.4 80.6
KRH15988 Soybean cytosol 23.94 79.49
CDY66035 Canola cytosol 79.15 78.85
Bra000455.1-P Field mustard cytosol 82.63 78.68
CDX83325 Canola cytosol 82.63 78.68
PGSC0003DMT400008912 Potato cytosol, plastid 77.22 78.43
CDX80121 Canola cytosol 79.15 77.95
Solyc01g097760.2.1 Tomato nucleus 77.61 77.91
PGSC0003DMT400057989 Potato cytosol 77.61 77.91
Solyc06g064460.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 77.22 77.52
Solyc06g064470.2.1 Tomato nucleus 77.22 77.52
Solyc06g050120.2.1 Tomato nucleus 77.22 77.22
CDX95727 Canola cytosol 82.63 76.7
VIT_14s0068g01640.t01 Wine grape mitochondrion 88.42 76.33
VIT_17s0000g00980.t01 Wine grape cytosol 88.03 76.0
CDX76668 Canola extracellular 82.63 75.89
VIT_14s0083g00970.t01 Wine grape plastid 87.64 75.42
KXG35979 Sorghum cytosol, mitochondrion 95.37 74.62
PGSC0003DMT400083237 Potato cytosol 70.27 73.09
CDY11453 Canola cytosol 83.01 72.15
PGSC0003DMT400015879 Potato cytosol 40.93 72.11
Solyc10g018810.1.1 Tomato cytosol 20.85 70.13
GSMUA_Achr6P21550_001 Banana cytosol 90.73 67.72
GSMUA_Achr6P14640_001 Banana cytosol 91.89 62.63
CDX92144 Canola extracellular 77.22 61.73
CDY03061 Canola extracellular 25.1 60.75
Solyc01g020290.1.1 Tomato cytosol 12.36 59.26
Solyc11g042870.1.1 Tomato cytosol 19.69 57.95
CDY25121 Canola cytosol 81.08 54.26
CDY34328 Canola nucleus 83.4 53.47
Bra013849.1-P Field mustard cytosol 83.4 53.47
CDY03403 Canola cytosol 83.01 52.57
CDX92662 Canola cytosol 77.61 48.55
Bra003512.1-P Field mustard cytosol 75.68 48.4
CDY11043 Canola cytosol 77.99 47.98
Bra019201.1-P Field mustard cytosol 77.99 47.98
CDY08962 Canola endoplasmic reticulum, extracellular 19.69 47.66
CDX67906 Canola extracellular 79.54 46.5
CDY33717 Canola cytosol 31.66 41.21
TraesCS4D01G148500.2 Wheat cytosol 22.01 38.78
CDY55536 Canola cytosol 10.42 25.96
CDX93958 Canola cytosol 10.42 25.96
CDX89151 Canola cytosol 10.42 25.71
CDY25120 Canola cytosol 7.34 15.2
Protein Annotations
MapMan:17.1.2.1.6Gene3D:3.30.1330.210ncoils:CoilGO:GO:0005575GO:GO:0008150GO:GO:0042254
GO:GO:1990904InterPro:IPR029064InterPro:IPR038524InterPro:L30e-likePFAM:PF01248PRINTS:PR00881
PRINTS:PR00882ScanProsite:PS01082PANTHER:PTHR23105PANTHER:PTHR23105:SF70InterPro:Ribosomal_L7A/L8InterPro:Ribosomal_L7A/L8_sf
InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45InterPro:Ribosomal_L7Ae/L8/Nhp2InterPro:Ribosomal_L7Ae_CSSUPFAM:SSF55315EnsemblPlantsGene:TraesCS5B01G287900EnsemblPlants:TraesCS5B01G287900.1
SEG:seg:::::
Description
No Description!
Coordinates
chr5B:-:473740340..473742222
Molecular Weight (calculated)
29410.8 Da
IEP (calculated)
11.088
GRAVY (calculated)
-0.480
Length
259 amino acids
Sequence
(BLAST)
001: MAPKRGGKAP VPAKKKAADK VVNPLFEKRP KQFGIGGALP PKKDLHRFVK WPKVVRIQRQ RRILKQRLKV PPALHQFTRT LDKNLATNLF KMLLKYRPED
101: KVAKKERLLK RAQAEAEGKT VEAKKPIVVK YGLNHVTYLI EQSKAQLVVI AHDVDPIELV VWLPALCRKM EVPYCIVKGK SRLGSIVHKK TASVLCLTTV
201: KNEDKLEFSK ILEAIKANFN DKFDEVRKKW GGGVMGSKSQ AKTKARERLI AKEAAQRMN
Best Arabidopsis Sequence Match ( AT3G62870.1 )
(BLAST)
001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN
Arabidopsis Description
RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.