Factsheet for Bra013849.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004442.1-P	Field mustard	cytosol	58.91	92.97
Bra014387.1-P	Field mustard	cytosol	58.66	92.58
Bra000455.1-P	Field mustard	cytosol	59.41	88.24
CDY34328	Canola	nucleus	88.12	88.12
CDY03403	Canola	cytosol	86.88	85.82
KRH31699	Soybean	cytosol, nucleus	54.7	85.0
Zm00001d006100_P001	Maize	plasma membrane	54.21	84.88
Os01t0924800-00	Rice	cytosol, golgi	33.17	84.81
KRH69083	Soybean	nucleus	54.46	84.62
Zm00001d021061_P001	Maize	cytosol, mitochondrion, plasma membrane	53.96	84.5
TraesCS7D01G262800.2	Wheat	cytosol	53.96	84.5
TraesCS7A01G261600.1	Wheat	cytosol, plastid	53.96	84.5
Os09t0507800-01	Rice	nucleus, plasma membrane	53.96	84.5
Os08t0326400-01	Rice	cytosol	53.96	84.5
Zm00001d031640_P001	Maize	mitochondrion	53.71	84.44
KRH24214	Soybean	nucleus	53.96	84.17
KRH29218	Soybean	endoplasmic reticulum, nucleus	53.96	84.17
TraesCS7B01G159700.1	Wheat	cytosol	53.71	84.11
EER99158	Sorghum	cytosol	53.47	83.72
TraesCS5A01G288400.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	53.47	83.4
TraesCS5B01G287900.1	Wheat	cytosol	53.47	83.4
TraesCS5D01G296200.1	Wheat	cytosol	53.47	83.4
GSMUA_Achr10P...	Banana	cytosol	53.71	81.27
HORVU7Hr1G054670.5	Barley	cytosol	53.96	80.74
PGSC0003DMT400057989	Potato	cytosol	50.99	79.84
Solyc01g097760.2.1	Tomato	nucleus	50.74	79.46
PGSC0003DMT400008912	Potato	cytosol, plastid	50.0	79.22
Solyc06g064460.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	50.49	79.07
Solyc06g064470.2.1	Tomato	nucleus	50.49	79.07
Solyc06g050120.2.1	Tomato	nucleus	50.25	78.38
GSMUA_Achr11P...	Banana	cytosol	53.71	78.34
HORVU5Hr1G076700.2	Barley	cytosol	53.71	76.41
Bra019201.1-P	Field mustard	cytosol	78.96	75.77
Solyc10g018810.1.1	Tomato	cytosol	14.36	75.32
GSMUA_Achr3P03600_001	Banana	cytosol	52.97	74.56
VIT_14s0083g00970.t01	Wine grape	plastid	54.21	72.76
PGSC0003DMT400083237	Potato	cytosol	44.55	72.29
PGSC0003DMT400015879	Potato	cytosol	26.24	72.11
KRH15988	Soybean	cytosol	13.61	70.51
Solyc01g020290.1.1	Tomato	cytosol	9.41	70.37
KXG35979	Sorghum	cytosol, mitochondrion	53.96	65.86
EES03046	Sorghum	cytosol	10.89	64.71
KXG25835	Sorghum	cytosol	10.64	63.24
GSMUA_Achr6P21550_001	Banana	cytosol	53.71	62.54
Solyc11g042870.1.1	Tomato	cytosol	13.61	62.5
GSMUA_Achr6P14640_001	Banana	cytosol	54.95	58.42
Bra003512.1-P	Field mustard	cytosol	53.96	53.83
TraesCS4D01G148500.2	Wheat	cytosol	11.63	31.97

Protein Annotations

MapMan:17.1.2.1.6	Gene3D:3.30.1330.210	EnsemblPlantsGene:Bra013849	EnsemblPlants:Bra013849.1	EnsemblPlants:Bra013849.1-P	ncoils:Coil
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0030529	GO:GO:0042254	GO:GO:1990904	InterPro:IPR029064	InterPro:IPR038524	InterPro:L30e-like
UniProt:M4DBI9	PFAM:PF01248	PRINTS:PR00881	PRINTS:PR00882	ScanProsite:PS01082	PANTHER:PTHR23105
PANTHER:PTHR23105:SF70	InterPro:Ribosomal_L7A/L8	InterPro:Ribosomal_L7A/L8_sf	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	InterPro:Ribosomal_L7Ae/L8/Nhp2	InterPro:Ribosomal_L7Ae_CS
SUPFAM:SSF55315	TMHMM:TMhelix	UniParc:UPI0002546662	SEG:seg	:	:

Description

AT2G47610 (E=1e-108) | 60S ribosomal protein L7A (RPL7aA)

Coordinates

chrA01:+:8052654..8055150

Molecular Weight (calculated)

46244.1 Da

IEP (calculated)

10.524

GRAVY (calculated)

-0.596

Length

404 amino acids

Sequence
(BLAST)

001: MEERHERLNQ QFTELEKEWA AMKTSKGSSA VSRITTEEAM EFVENSPRKL MLSLQHDEVC PEAEMRSPCR RKLFHGSDDD NDDETKMTPL SHSTCWSSNV
101: MRVGCTNKNK KEMKKKKKKI GMIVCVSMVV ILLMSMFLAV LIDGFDNRQA PKKGVKAVTK KKSEKVTNPL FERRPKQFGI GGALPPKKDL TRYIKWPKSI
201: RLQRQKRILK QRLKVPPALN QFTKTLDKNL ATSLFKMMLK YRPEDKAAKK ERLLKKAQAE AEGKTVESKK PIVVKYGLNH VTYLIEQNKA QLVVIAHDVD
301: PIELVVWLPA LCRKMEVPYC IVKGKSRLGA IVHQKTAACL CLTTVKNEDK MEFSKILEAI KANFNDKYEE YRKKWGGGIM GSKSQAKTKA KERVLAKEAA
401: QRMN

Best Arabidopsis Sequence Match ( AT3G62870.1 )
(BLAST)

001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN

Arabidopsis Description

RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.