Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55535 | Canola | extracellular | 21.53 | 91.58 |
| CDX93955 | Canola | cytosol | 58.42 | 89.73 |
| CDX89154 | Canola | cytosol | 58.66 | 88.43 |
| Bra013849.1-P | Field mustard | cytosol | 88.12 | 88.12 |
| CDY66035 | Canola | cytosol | 56.44 | 87.69 |
| CDX83325 | Canola | cytosol | 58.91 | 87.5 |
| CDX80121 | Canola | cytosol | 56.44 | 86.69 |
| CDX95727 | Canola | cytosol | 59.16 | 85.66 |
| Zm00001d006100_P001 | Maize | plasma membrane | 54.46 | 85.27 |
| CDY03403 | Canola | cytosol | 86.14 | 85.09 |
| Zm00001d021061_P001 | Maize | cytosol, mitochondrion, plasma membrane | 54.21 | 84.88 |
| Zm00001d031640_P001 | Maize | mitochondrion | 53.96 | 84.82 |
| CDX76668 | Canola | extracellular | 59.16 | 84.75 |
| EER99158 | Sorghum | cytosol | 53.96 | 84.5 |
| Os08t0326400-01 | Rice | cytosol | 53.96 | 84.5 |
| Os09t0507800-01 | Rice | nucleus, plasma membrane | 53.96 | 84.5 |
| TraesCS7A01G261600.1 | Wheat | cytosol, plastid | 53.96 | 84.5 |
| TraesCS7D01G262800.2 | Wheat | cytosol | 53.96 | 84.5 |
| KRH31699 | Soybean | cytosol, nucleus | 54.21 | 84.23 |
| Os01t0924800-00 | Rice | cytosol, golgi | 32.92 | 84.18 |
| TraesCS7B01G159700.1 | Wheat | cytosol | 53.71 | 84.11 |
| KRH69083 | Soybean | nucleus | 53.96 | 83.85 |
| KRH29218 | Soybean | endoplasmic reticulum, nucleus | 53.71 | 83.78 |
| KRH24214 | Soybean | nucleus | 53.71 | 83.78 |
| TraesCS5B01G287900.1 | Wheat | cytosol | 53.47 | 83.4 |
| TraesCS5A01G288400.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 53.47 | 83.4 |
| TraesCS5D01G296200.1 | Wheat | cytosol | 53.47 | 83.4 |
| GSMUA_Achr10P... | Banana | cytosol | 53.71 | 81.27 |
| HORVU7Hr1G054670.5 | Barley | cytosol | 53.96 | 80.74 |
| CDY11453 | Canola | cytosol | 59.41 | 80.54 |
| GSMUA_Achr11P... | Banana | cytosol | 53.22 | 77.62 |
| HORVU5Hr1G076700.2 | Barley | cytosol | 53.96 | 76.76 |
| CDY11043 | Canola | cytosol | 79.21 | 76.01 |
| GSMUA_Achr3P03600_001 | Banana | cytosol | 52.48 | 73.87 |
| KRH15988 | Soybean | cytosol | 13.61 | 70.51 |
| CDY03061 | Canola | extracellular | 18.32 | 69.16 |
| CDX92144 | Canola | extracellular | 55.2 | 68.83 |
| KXG35979 | Sorghum | cytosol, mitochondrion | 54.21 | 66.16 |
| EES03046 | Sorghum | cytosol | 10.89 | 64.71 |
| KXG25835 | Sorghum | cytosol | 10.64 | 63.24 |
| GSMUA_Achr6P21550_001 | Banana | cytosol | 53.96 | 62.82 |
| CDY08962 | Canola | endoplasmic reticulum, extracellular | 16.09 | 60.75 |
| CDY25121 | Canola | cytosol | 56.68 | 59.17 |
| GSMUA_Achr6P14640_001 | Banana | cytosol | 54.95 | 58.42 |
| CDX92662 | Canola | cytosol | 58.91 | 57.49 |
| CDX67906 | Canola | extracellular | 56.19 | 51.24 |
| CDY33717 | Canola | cytosol | 20.3 | 41.21 |
| TraesCS4D01G148500.2 | Wheat | cytosol | 11.63 | 31.97 |
| CDY55536 | Canola | cytosol | 4.7 | 18.27 |
| CDX93958 | Canola | cytosol | 4.7 | 18.27 |
| CDX89151 | Canola | cytosol | 4.7 | 18.1 |
| CDY25120 | Canola | cytosol | 3.47 | 11.2 |
Protein Annotations
| MapMan:17.1.2.1.6 | Gene3D:3.30.1330.210 | GO:A0A078HC20 | UniProt:A0A078HC20 | EnsemblPlants:CDY34328 | ProteinID:CDY34328 |
| ProteinID:CDY34328.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0030529 | GO:GO:0042254 | GO:GO:1990904 | EnsemblPlantsGene:GSBRNA2T00056367001 | InterPro:IPR029064 |
| InterPro:IPR038524 | InterPro:L30e-like | PFAM:PF01248 | PRINTS:PR00881 | PRINTS:PR00882 | ScanProsite:PS01082 |
| PANTHER:PTHR23105 | PANTHER:PTHR23105:SF70 | InterPro:Ribosomal_L7A/L8 | InterPro:Ribosomal_L7A/L8_sf | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 | InterPro:Ribosomal_L7Ae/L8/Nhp2 |
| InterPro:Ribosomal_L7Ae_CS | SUPFAM:SSF55315 | TMHMM:TMhelix | UniParc:UPI0004EDC3BE | SEG:seg | : |
Description
BnaA01g14310DBnaA01g14310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC20]
Coordinates
chrLK032332:+:314644..317325
Molecular Weight (calculated)
46294.2 Da
IEP (calculated)
10.542
GRAVY (calculated)
-0.608
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MEERHERLNK QFSELEKEWA AMKTSKGSSA VSRITTEEAM EFVENSPRKL MLSLQHDEVC PEAEMRSPCR RKLFHGSDDD NDDETKMTPL SHSTCWSSNV
101: MRVGCTNKNK KEMKKKKKKI GMIVCVSMVV FLLMSMFLAV LIDGFDNRQA PKKGVKAVTK KKSEKVTNPL FERRPKQFGI GGALPPKKDL TRYIKWPKSI
201: RLQRQKRILK QRLKVPPALN QFTKTLDKNL ATSLFKMMLK YRPEDKAAKK ERLLKKAQAE TEGKTVESKK PIVVKYGLNH VTYLIEQNKA QLVVIAHDVD
301: PIELVVWLPA LCRKMEVPYC IVKGKSRLGA IVHQKTAACL CLTTVKNEDK MEFSKILEAI KANFNDKYEE YRKKWGGGIM GSKSQAKTKA KERVLAKEAA
401: QRMN
101: MRVGCTNKNK KEMKKKKKKI GMIVCVSMVV FLLMSMFLAV LIDGFDNRQA PKKGVKAVTK KKSEKVTNPL FERRPKQFGI GGALPPKKDL TRYIKWPKSI
201: RLQRQKRILK QRLKVPPALN QFTKTLDKNL ATSLFKMMLK YRPEDKAAKK ERLLKKAQAE TEGKTVESKK PIVVKYGLNH VTYLIEQNKA QLVVIAHDVD
301: PIELVVWLPA LCRKMEVPYC IVKGKSRLGA IVHQKTAACL CLTTVKNEDK MEFSKILEAI KANFNDKYEE YRKKWGGGIM GSKSQAKTKA KERVLAKEAA
401: QRMN
001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN
Arabidopsis Description
RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.