CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 28052459

msms PMID: 28052459 doi

A Ostendorp, S Pahlow, L Krüßel, P Hanhart, MY Garbe, J Deke, P Giavalisco, J Kehr

Max Planck Institute of Molecular Plant Physiology, am Mühlenberg 1, Potsdam, 14476, Germany., Molecular Plant Genetics, University Hamburg, Biocenter Klein Flottbek, Ohnhorststr. 18, Hamburg, 22609, Germany.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03046	Sorghum	cytosol	46.32	64.71
KXG25835	Sorghum	cytosol	46.32	64.71
CDY03061	Canola	extracellular	72.63	64.49
Os01t0924800-00	Rice	cytosol, golgi	75.79	45.57
CDY66035	Canola	cytosol	94.74	34.62
CDX93955	Canola	cytosol	94.74	34.22
CDX80121	Canola	cytosol	94.74	34.22
CDX89154	Canola	cytosol	94.74	33.58
CDX83325	Canola	cytosol	91.58	31.99
CDX76668	Canola	extracellular	94.74	31.91
CDX95727	Canola	cytosol	91.58	31.18
KRH24214	Soybean	nucleus	83.16	30.5
KRH31699	Soybean	cytosol, nucleus	83.16	30.38
KRH69083	Soybean	nucleus	83.16	30.38
CDY11453	Canola	cytosol	94.74	30.2
KRH29218	Soybean	endoplasmic reticulum, nucleus	82.11	30.12
TraesCS7D01G262800.2	Wheat	cytosol	81.05	29.84
TraesCS7A01G261600.1	Wheat	cytosol, plastid	81.05	29.84
TraesCS7B01G159700.1	Wheat	cytosol	81.05	29.84
TraesCS5A01G288400.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	81.05	29.73
TraesCS5B01G287900.1	Wheat	cytosol	81.05	29.73
TraesCS5D01G296200.1	Wheat	cytosol	81.05	29.73
Zm00001d031640_P001	Maize	mitochondrion	80.0	29.57
Zm00001d006100_P001	Maize	plasma membrane	80.0	29.46
Zm00001d021061_P001	Maize	cytosol, mitochondrion, plasma membrane	78.95	29.07
Os09t0507800-01	Rice	nucleus, plasma membrane	78.95	29.07
Os08t0326400-01	Rice	cytosol	78.95	29.07
EER99158	Sorghum	cytosol	78.95	29.07
HORVU7Hr1G054670.5	Barley	cytosol	81.05	28.52
GSMUA_Achr10P...	Banana	cytosol	76.84	27.34
HORVU5Hr1G076700.2	Barley	cytosol	81.05	27.11
GSMUA_Achr11P...	Banana	cytosol	75.79	25.99
GSMUA_Achr3P03600_001	Banana	cytosol	75.79	25.09
KXG35979	Sorghum	cytosol, mitochondrion	78.95	22.66
CDX92144	Canola	extracellular	76.84	22.53
CDY34328	Canola	nucleus	91.58	21.53
CDY03403	Canola	cytosol	91.58	21.27
GSMUA_Achr6P21550_001	Banana	cytosol	76.84	21.04
CDY25121	Canola	cytosol	85.26	20.93
GSMUA_Achr6P14640_001	Banana	cytosol	77.89	19.47
CDX92662	Canola	cytosol	83.16	19.08
CDY11043	Canola	cytosol	83.16	18.76
KRH15988	Soybean	cytosol	14.74	17.95
CDX67906	Canola	extracellular	83.16	17.83
CDX93958	Canola	cytosol	7.37	6.73
CDY55536	Canola	cytosol	7.37	6.73
CDX89151	Canola	cytosol	7.37	6.67
TraesCS4D01G148500.2	Wheat	cytosol	8.42	5.44
CDY25120	Canola	cytosol	5.26	4.0
CDY08962	Canola	endoplasmic reticulum, extracellular	3.16	2.8
CDY33717	Canola	cytosol	5.26	2.51

Protein Annotations

EnsemblPlants:CDY55535	EnsemblPlantsGene:GSBRNA2T00017009001	Gene3D:3.30.1330.210	InterPro:IPR029064	InterPro:IPR038524	InterPro:L30e-like
InterPro:Ribosomal_L7A/L8	InterPro:Ribosomal_L7A/L8_sf	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	PANTHER:PTHR23105	PANTHER:PTHR23105:SF70	PFAM:PF01248
PRINTS:PR00882	ProteinID:CDY55535	ProteinID:CDY55535.1	SUPFAM:SSF55315	UniParc:UPI0004EE4954	UniProt:A0A078IYP6
MapMan:35.1	:	:	:	:	:

Description

BnaA04g29580DBnaA04g29580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYP6]

Coordinates

chrLK033411:+:55401..55991

Molecular Weight (calculated)

10790.2 Da

IEP (calculated)

10.341

GRAVY (calculated)

-0.691

Length

95 amino acids

Sequence
(BLAST)

1: MKEWPQPLPY CIVKGKSRLG TVVHQKTAAC LCLTTVKNED KLEFSKILEA IKANFNDKYE EYRKKWGGGI MGSKSQAKTK AKERVLAKEA AQRMN

Best Arabidopsis Sequence Match ( AT2G47610.1 )
(BLAST)

001: MAPKKGVKVA AKKKTAEKVS NPLFERRPKQ FGIGGALPPK KDLSRYIKWP KSIRLQRQKR ILKQRLKVPP ALNQFTKTLD KNLATSLFKV LLKYRPEDKA
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN

Arabidopsis Description

RPL7AA60S ribosomal protein L7a-1 [Source:UniProtKB/Swiss-Prot;Acc:P49692]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.