CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93955	Canola	cytosol	54.11	85.17
CDX83325	Canola	cytosol	55.07	83.82
CDX89154	Canola	cytosol	54.11	83.58
CDY55535	Canola	extracellular	19.08	83.16
CDY66035	Canola	cytosol	51.69	82.31
CDX95727	Canola	cytosol	54.83	81.36
CDX76668	Canola	extracellular	55.31	81.21
CDX80121	Canola	cytosol	51.45	80.99
KRH31699	Soybean	cytosol, nucleus	49.52	78.85
KRH24214	Soybean	nucleus	49.28	78.76
KRH29218	Soybean	endoplasmic reticulum, nucleus	49.28	78.76
TraesCS7A01G261600.1	Wheat	cytosol, plastid	49.03	78.68
TraesCS7D01G262800.2	Wheat	cytosol	49.03	78.68
KRH69083	Soybean	nucleus	49.28	78.46
TraesCS7B01G159700.1	Wheat	cytosol	48.79	78.29
Zm00001d006100_P001	Maize	plasma membrane	48.55	77.91
TraesCS5D01G296200.1	Wheat	cytosol	48.55	77.61
TraesCS5B01G287900.1	Wheat	cytosol	48.55	77.61
TraesCS5A01G288400.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	48.55	77.61
Os09t0507800-01	Rice	nucleus, plasma membrane	48.31	77.52
Os08t0326400-01	Rice	cytosol	48.31	77.52
Zm00001d021061_P001	Maize	cytosol, mitochondrion, plasma membrane	48.31	77.52
Zm00001d031640_P001	Maize	mitochondrion	48.07	77.43
EER99158	Sorghum	cytosol	47.83	76.74
Os01t0924800-00	Rice	cytosol, golgi	29.23	76.58
CDY11453	Canola	cytosol	54.59	75.84
GSMUA_Achr10P...	Banana	cytosol	48.79	75.66
HORVU7Hr1G054670.5	Barley	cytosol	49.28	75.56
CDY03061	Canola	extracellular	19.08	73.83
GSMUA_Achr11P...	Banana	cytosol	48.31	72.2
HORVU5Hr1G076700.2	Barley	cytosol	48.79	71.13
GSMUA_Achr3P03600_001	Banana	cytosol	48.55	70.03
CDX92144	Canola	extracellular	50.48	64.51
CDY11043	Canola	cytosol	65.46	64.37
EES03046	Sorghum	cytosol	10.39	63.24
CDY08962	Canola	endoplasmic reticulum, extracellular	16.18	62.62
KXG25835	Sorghum	cytosol	10.14	61.76
KXG35979	Sorghum	cytosol, mitochondrion	48.31	60.42
KRH15988	Soybean	cytosol	11.35	60.26
CDY34328	Canola	nucleus	57.49	58.91
GSMUA_Achr6P21550_001	Banana	cytosol	49.03	58.5
CDY03403	Canola	cytosol	57.73	58.44
CDY25121	Canola	cytosol	53.86	57.62
GSMUA_Achr6P14640_001	Banana	cytosol	51.45	56.05
CDX67906	Canola	extracellular	51.69	48.31
CDY33717	Canola	cytosol	20.77	43.22
TraesCS4D01G148500.2	Wheat	cytosol	11.59	32.65
CDY55536	Canola	cytosol	4.35	17.31
CDX93958	Canola	cytosol	4.35	17.31
CDX89151	Canola	cytosol	4.35	17.14
CDY25120	Canola	cytosol	3.14	10.4

Protein Annotations

MapMan:17.1.2.1.6	Gene3D:3.30.1330.210	GO:A0A078DUR6	EnsemblPlants:CDX92662	ProteinID:CDX92662	ProteinID:CDX92662.1
GO:GO:0005575	GO:GO:0008150	GO:GO:0042254	GO:GO:1990904	EnsemblPlantsGene:GSBRNA2T00154473001	InterPro:IPR029064
InterPro:IPR038524	InterPro:L30e-like	PFAM:PF01248	PRINTS:PR00881	PRINTS:PR00882	ScanProsite:PS01082
PANTHER:PTHR23105	PANTHER:PTHR23105:SF70	InterPro:Ribosomal_L7A/L8	InterPro:Ribosomal_L7A/L8_sf	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	InterPro:Ribosomal_L7Ae/L8/Nhp2
InterPro:Ribosomal_L7Ae_CS	SUPFAM:SSF55315	TMHMM:TMhelix	UniParc:UPI0004EAFE71	SEG:seg	:

Description

BnaC07g39200D

Coordinates

chrLK031873:+:229322..232535

Molecular Weight (calculated)

47121.7 Da

IEP (calculated)

10.484

GRAVY (calculated)

-0.616

Length

414 amino acids

Sequence
(BLAST)

001: MEVKEENPHE RLKQKLSELE KVWTAMKEGK SSSAVSCITV EEALELVENS PRKLMISLQH DQAGSEVEMR SPYRRKLFHD SDDDDDETRT TRLSHSTCWS
101: SNVTRAGDNN NNKINKKHEK KKNRGSIVSV CVIVILLCVL VVLINGFDQL SMNREIYNLA PKKGVKAVTK KKPEKVTNPL FERRPKQFGI GGALPPKKDL
201: TRYIKWPKSI RLQRQKRILK QRLKVPPALH QFTKTLDKNL ATSLLKILLK YRPEDKAAKK ERLLKKAQAE AEGKPAESKK PIAVKYGLNH VTYLIEQNKA
301: QLVVIAHDVD PIELVVWLPA LCRKMEVPYC IIKGKSRLGA IVHQKTAACL CLTTVKNEDK MEFSKVLEAI KANFNDKYEE NRKKWGGGIM GSKSQAKTKA
401: KERVLAKEAA QRMN

Best Arabidopsis Sequence Match ( AT3G62870.1 )
(BLAST)

001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN

Arabidopsis Description

RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.