Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G47610.1 | KRH12155 | AT1G30860.1 | 21798944 |
| AT2G47610.1 | KRH37161 | AT1G30860.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69083 | Soybean | nucleus | 99.23 | 99.23 |
| KRH24214 | Soybean | nucleus | 93.08 | 93.44 |
| KRH29218 | Soybean | endoplasmic reticulum, nucleus | 93.08 | 93.44 |
| Os01t0924800-00 | Rice | cytosol, golgi | 54.23 | 89.24 |
| Os09t0507800-01 | Rice | nucleus, plasma membrane | 88.08 | 88.76 |
| Os08t0326400-01 | Rice | cytosol | 88.08 | 88.76 |
| Zm00001d006100_P001 | Maize | plasma membrane | 87.69 | 88.37 |
| EER99158 | Sorghum | cytosol | 87.31 | 87.98 |
| Zm00001d021061_P001 | Maize | cytosol, mitochondrion, plasma membrane | 87.31 | 87.98 |
| Zm00001d031640_P001 | Maize | mitochondrion | 86.92 | 87.94 |
| TraesCS7D01G262800.2 | Wheat | cytosol | 86.54 | 87.21 |
| TraesCS7A01G261600.1 | Wheat | cytosol, plastid | 86.54 | 87.21 |
| TraesCS7B01G159700.1 | Wheat | cytosol | 86.15 | 86.82 |
| GSMUA_Achr10P... | Banana | cytosol | 88.46 | 86.14 |
| TraesCS5D01G296200.1 | Wheat | cytosol | 85.77 | 86.1 |
| TraesCS5A01G288400.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 85.77 | 86.1 |
| TraesCS5B01G287900.1 | Wheat | cytosol | 85.77 | 86.1 |
| Bra004442.1-P | Field mustard | cytosol | 84.62 | 85.94 |
| Bra014387.1-P | Field mustard | cytosol | 84.23 | 85.55 |
| AT2G47610.1 | Thale cress | cytosol | 84.23 | 85.21 |
| AT3G62870.1 | Thale cress | cytosol | 83.85 | 85.16 |
| CDX93955 | Canola | cytosol | 84.62 | 83.65 |
| CDY55535 | Canola | extracellular | 30.38 | 83.16 |
| HORVU7Hr1G054670.5 | Barley | cytosol | 86.15 | 82.96 |
| CDX89154 | Canola | cytosol | 84.62 | 82.09 |
| GSMUA_Achr11P... | Banana | cytosol | 86.92 | 81.59 |
| PGSC0003DMT400008912 | Potato | cytosol, plastid | 79.62 | 81.18 |
| CDY66035 | Canola | cytosol | 81.15 | 81.15 |
| Solyc06g064460.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 80.0 | 80.62 |
| Solyc01g097760.2.1 | Tomato | nucleus | 80.0 | 80.62 |
| PGSC0003DMT400057989 | Potato | cytosol | 80.0 | 80.62 |
| Solyc06g064470.2.1 | Tomato | nucleus | 79.62 | 80.23 |
| CDX80121 | Canola | cytosol | 81.15 | 80.23 |
| Solyc06g050120.2.1 | Tomato | nucleus | 79.62 | 79.92 |
| Bra000455.1-P | Field mustard | cytosol | 83.46 | 79.78 |
| CDX83325 | Canola | cytosol | 83.46 | 79.78 |
| KRH15988 | Soybean | cytosol | 23.85 | 79.49 |
| HORVU5Hr1G076700.2 | Barley | cytosol | 86.15 | 78.87 |
| CDX76668 | Canola | extracellular | 85.0 | 78.37 |
| GSMUA_Achr3P03600_001 | Banana | cytosol | 86.15 | 78.05 |
| CDX95727 | Canola | cytosol | 83.08 | 77.42 |
| VIT_14s0068g01640.t01 | Wine grape | mitochondrion | 88.85 | 77.0 |
| PGSC0003DMT400015879 | Potato | cytosol | 42.31 | 74.83 |
| PGSC0003DMT400083237 | Potato | cytosol | 71.54 | 74.7 |
| CDY11453 | Canola | cytosol | 85.38 | 74.5 |
| Solyc10g018810.1.1 | Tomato | cytosol | 21.15 | 71.43 |
| KXG35979 | Sorghum | cytosol, mitochondrion | 87.31 | 68.58 |
| EES03046 | Sorghum | cytosol | 16.92 | 64.71 |
| GSMUA_Achr6P21550_001 | Banana | cytosol | 86.15 | 64.55 |
| CDX92144 | Canola | extracellular | 79.62 | 63.89 |
| KXG25835 | Sorghum | cytosol | 16.54 | 63.24 |
| Solyc01g020290.1.1 | Tomato | cytosol | 13.08 | 62.96 |
| CDY03061 | Canola | extracellular | 25.38 | 61.68 |
| GSMUA_Achr6P14640_001 | Banana | cytosol | 88.08 | 60.26 |
| Solyc11g042870.1.1 | Tomato | cytosol | 19.62 | 57.95 |
| CDY25121 | Canola | cytosol | 82.31 | 55.3 |
| Bra013849.1-P | Field mustard | cytosol | 85.0 | 54.7 |
| CDY34328 | Canola | nucleus | 84.23 | 54.21 |
| CDY03403 | Canola | cytosol | 83.46 | 53.06 |
| CDY08962 | Canola | endoplasmic reticulum, extracellular | 21.15 | 51.4 |
| Bra003512.1-P | Field mustard | cytosol | 77.31 | 49.63 |
| CDX92662 | Canola | cytosol | 78.85 | 49.52 |
| Bra019201.1-P | Field mustard | cytosol | 80.0 | 49.41 |
| CDY11043 | Canola | cytosol | 80.0 | 49.41 |
| CDX67906 | Canola | extracellular | 81.15 | 47.63 |
| CDY33717 | Canola | cytosol | 31.92 | 41.71 |
| TraesCS4D01G148500.2 | Wheat | cytosol | 19.23 | 34.01 |
| CDX93958 | Canola | cytosol | 9.23 | 23.08 |
| CDY55536 | Canola | cytosol | 9.23 | 23.08 |
| CDX89151 | Canola | cytosol | 9.23 | 22.86 |
| CDY25120 | Canola | cytosol | 6.15 | 12.8 |
Protein Annotations
| EntrezGene:100797399 | MapMan:17.1.2.1.6 | Gene3D:3.30.1330.210 | EMBL:ACUP02006076 | EMBL:BT095056 | UniProt:C6TBY0 |
| EnsemblPlantsGene:GLYMA_10G006200 | GO:GO:0000470 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 |
| GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0022625 | GO:GO:0030529 | GO:GO:0042254 | GO:GO:1990904 | InterPro:IPR029064 |
| InterPro:IPR038524 | EnsemblPlants:KRH31699 | ProteinID:KRH31699 | ProteinID:KRH31699.1 | InterPro:L30e-like | PFAM:PF01248 |
| PRINTS:PR00881 | PRINTS:PR00882 | ScanProsite:PS01082 | PANTHER:PTHR23105 | PANTHER:PTHR23105:SF70 | InterPro:Ribosomal_L7A/L8 |
| InterPro:Ribosomal_L7A/L8_sf | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 | InterPro:Ribosomal_L7Ae/L8/Nhp2 | InterPro:Ribosomal_L7Ae_CS | SUPFAM:SSF55315 | UniParc:UPI0001B15DEF |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:613862..616294
Molecular Weight (calculated)
29638.0 Da
IEP (calculated)
10.914
GRAVY (calculated)
-0.559
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKKGVKGS VVAAKKKVQE KVTNPLFEKR PKQFGIGGAL PPKRDLTRFV KWPKNVQIQR KKRILKQRLK VPPALNQFTK TLDKNLATNL FKMLLKYRPE
101: DKAEKKERLL KRAQAEADGK PVEAKKPIVV KYGLNHVTYL IEQNKAQLVV IAHDVDPIEL VVWLPALCRK MEIPYCIVKG KARLGTIVHK KTASVLCLTT
201: VKNEDKMEFS RILEAIKANF NDKYDEYRKK WGGGIMGSKS QAKTRAKEKL LAKEAAQRMN
101: DKAEKKERLL KRAQAEADGK PVEAKKPIVV KYGLNHVTYL IEQNKAQLVV IAHDVDPIEL VVWLPALCRK MEIPYCIVKG KARLGTIVHK KTASVLCLTT
201: VKNEDKMEFS RILEAIKANF NDKYDEYRKK WGGGIMGSKS QAKTRAKEKL LAKEAAQRMN
001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN
Arabidopsis Description
RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.