Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55535 | Canola | extracellular | 64.49 | 72.63 |
| EES03046 | Sorghum | cytosol | 40.19 | 63.24 |
| KXG25835 | Sorghum | cytosol | 39.25 | 61.76 |
| Os01t0924800-00 | Rice | cytosol, golgi | 58.88 | 39.87 |
| CDY66035 | Canola | cytosol | 67.29 | 27.69 |
| CDX80121 | Canola | cytosol | 67.29 | 27.38 |
| CDX93955 | Canola | cytosol | 67.29 | 27.38 |
| CDX89154 | Canola | cytosol | 67.29 | 26.87 |
| CDX83325 | Canola | cytosol | 67.29 | 26.47 |
| CDX95727 | Canola | cytosol | 67.29 | 25.81 |
| CDX76668 | Canola | extracellular | 67.29 | 25.53 |
| KRH24214 | Soybean | nucleus | 61.68 | 25.48 |
| KRH69083 | Soybean | nucleus | 61.68 | 25.38 |
| KRH31699 | Soybean | cytosol, nucleus | 61.68 | 25.38 |
| Zm00001d031640_P001 | Maize | mitochondrion | 60.75 | 25.29 |
| Zm00001d006100_P001 | Maize | plasma membrane | 60.75 | 25.19 |
| TraesCS7D01G262800.2 | Wheat | cytosol | 60.75 | 25.19 |
| TraesCS7B01G159700.1 | Wheat | cytosol | 60.75 | 25.19 |
| TraesCS7A01G261600.1 | Wheat | cytosol, plastid | 60.75 | 25.19 |
| TraesCS5A01G288400.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 60.75 | 25.1 |
| TraesCS5B01G287900.1 | Wheat | cytosol | 60.75 | 25.1 |
| TraesCS5D01G296200.1 | Wheat | cytosol | 60.75 | 25.1 |
| KRH29218 | Soybean | endoplasmic reticulum, nucleus | 60.75 | 25.1 |
| Zm00001d021061_P001 | Maize | cytosol, mitochondrion, plasma membrane | 59.81 | 24.81 |
| Os09t0507800-01 | Rice | nucleus, plasma membrane | 59.81 | 24.81 |
| Os08t0326400-01 | Rice | cytosol | 59.81 | 24.81 |
| EER99158 | Sorghum | cytosol | 59.81 | 24.81 |
| CDY11453 | Canola | cytosol | 67.29 | 24.16 |
| HORVU7Hr1G054670.5 | Barley | cytosol | 60.75 | 24.07 |
| GSMUA_Achr10P... | Banana | cytosol | 57.94 | 23.22 |
| HORVU5Hr1G076700.2 | Barley | cytosol | 60.75 | 22.89 |
| GSMUA_Achr11P... | Banana | cytosol | 57.01 | 22.02 |
| GSMUA_Achr3P03600_001 | Banana | cytosol | 57.01 | 21.25 |
| KXG35979 | Sorghum | cytosol, mitochondrion | 59.81 | 19.34 |
| CDX92662 | Canola | cytosol | 73.83 | 19.08 |
| CDY11043 | Canola | cytosol | 73.83 | 18.76 |
| CDY34328 | Canola | nucleus | 69.16 | 18.32 |
| CDY03403 | Canola | cytosol | 69.16 | 18.09 |
| GSMUA_Achr6P21550_001 | Banana | cytosol | 57.94 | 17.87 |
| CDX92144 | Canola | extracellular | 51.4 | 16.98 |
| GSMUA_Achr6P14640_001 | Banana | cytosol | 58.88 | 16.58 |
| CDY25121 | Canola | cytosol | 58.88 | 16.28 |
| CDX67906 | Canola | extracellular | 57.94 | 14.0 |
| TraesCS4D01G148500.2 | Wheat | cytosol | 7.48 | 5.44 |
| KRH15988 | Soybean | cytosol | 3.74 | 5.13 |
| CDY25120 | Canola | cytosol | 5.61 | 4.8 |
| CDX93958 | Canola | cytosol | 3.74 | 3.85 |
| CDY55536 | Canola | cytosol | 3.74 | 3.85 |
| CDX89151 | Canola | cytosol | 3.74 | 3.81 |
| CDY33717 | Canola | cytosol | 5.61 | 3.02 |
| CDY08962 | Canola | endoplasmic reticulum, extracellular | 0.93 | 0.93 |
Protein Annotations
| EnsemblPlants:CDY03061 | EnsemblPlantsGene:GSBRNA2T00115395001 | Gene3D:3.30.1330.210 | InterPro:IPR038524 | InterPro:Ribosomal_L7A/L8 | InterPro:Ribosomal_L7A/L8_sf |
| PANTHER:PTHR23105 | PANTHER:PTHR23105:SF70 | PRINTS:PR00882 | ProteinID:CDY03061 | ProteinID:CDY03061.1 | UniParc:UPI0004EE9181 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC07g21660D
Coordinates
chrLK031939:+:684071..684575
Molecular Weight (calculated)
11979.9 Da
IEP (calculated)
9.622
GRAVY (calculated)
-0.203
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGIGNYDCL LTVKKNLVLD LCSLIPLLMT CLQIVHQKTA ACLCLTTVKN EDKMEFSKVL EAIKANFNDK YEENRKKWGG GIMGSKSQAK TKAKERVLAK
101: EAAQRMN
101: EAAQRMN
001: MAPKKGVKVA AKKKTAEKVS NPLFERRPKQ FGIGGALPPK KDLSRYIKWP KSIRLQRQKR ILKQRLKVPP ALNQFTKTLD KNLATSLFKV LLKYRPEDKA
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN
Arabidopsis Description
RPL7AA60S ribosomal protein L7a-1 [Source:UniProtKB/Swiss-Prot;Acc:P49692]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.