Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93955 | Canola | cytosol | 84.56 | 95.82 |
| AT3G62870.1 | Thale cress | cytosol | 81.54 | 94.92 |
| CDY55535 | Canola | extracellular | 30.2 | 94.74 |
| CDX89154 | Canola | cytosol | 84.9 | 94.4 |
| CDY66035 | Canola | cytosol | 81.21 | 93.08 |
| CDX80121 | Canola | cytosol | 81.21 | 92.02 |
| CDX76668 | Canola | extracellular | 86.58 | 91.49 |
| CDX83325 | Canola | cytosol | 82.21 | 90.07 |
| CDX95727 | Canola | cytosol | 82.21 | 87.81 |
| CDX92144 | Canola | extracellular | 94.3 | 86.73 |
| KRH31699 | Soybean | cytosol, nucleus | 74.5 | 85.38 |
| KRH69083 | Soybean | nucleus | 74.16 | 85.0 |
| KRH24214 | Soybean | nucleus | 73.49 | 84.56 |
| KRH29218 | Soybean | endoplasmic reticulum, nucleus | 73.49 | 84.56 |
| Zm00001d006100_P001 | Maize | plasma membrane | 73.15 | 84.5 |
| TraesCS7D01G262800.2 | Wheat | cytosol | 73.15 | 84.5 |
| TraesCS7A01G261600.1 | Wheat | cytosol, plastid | 73.15 | 84.5 |
| TraesCS7B01G159700.1 | Wheat | cytosol | 72.82 | 84.11 |
| Os09t0507800-01 | Rice | nucleus, plasma membrane | 72.82 | 84.11 |
| Os08t0326400-01 | Rice | cytosol | 72.82 | 84.11 |
| Zm00001d021061_P001 | Maize | cytosol, mitochondrion, plasma membrane | 72.82 | 84.11 |
| Zm00001d031640_P001 | Maize | mitochondrion | 72.15 | 83.66 |
| EER99158 | Sorghum | cytosol | 72.15 | 83.33 |
| TraesCS5B01G287900.1 | Wheat | cytosol | 72.15 | 83.01 |
| TraesCS5A01G288400.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 72.15 | 83.01 |
| TraesCS5D01G296200.1 | Wheat | cytosol | 72.15 | 83.01 |
| Os01t0924800-00 | Rice | cytosol, golgi | 43.62 | 82.28 |
| HORVU7Hr1G054670.5 | Barley | cytosol | 73.15 | 80.74 |
| GSMUA_Achr10P... | Banana | cytosol | 71.81 | 80.15 |
| GSMUA_Achr11P... | Banana | cytosol | 71.81 | 77.26 |
| HORVU5Hr1G076700.2 | Barley | cytosol | 72.82 | 76.41 |
| KRH15988 | Soybean | cytosol | 19.46 | 74.36 |
| GSMUA_Achr3P03600_001 | Banana | cytosol | 71.14 | 73.87 |
| CDY03061 | Canola | extracellular | 24.16 | 67.29 |
| KXG35979 | Sorghum | cytosol, mitochondrion | 73.49 | 66.16 |
| EES03046 | Sorghum | cytosol | 14.77 | 64.71 |
| KXG25835 | Sorghum | cytosol | 14.77 | 64.71 |
| CDY25121 | Canola | cytosol | 83.22 | 64.08 |
| GSMUA_Achr6P21550_001 | Banana | cytosol | 71.48 | 61.38 |
| CDY08962 | Canola | endoplasmic reticulum, extracellular | 21.48 | 59.81 |
| CDY34328 | Canola | nucleus | 80.54 | 59.41 |
| CDY03403 | Canola | cytosol | 80.2 | 58.44 |
| GSMUA_Achr6P14640_001 | Banana | cytosol | 73.15 | 57.37 |
| CDX92662 | Canola | cytosol | 75.84 | 54.59 |
| CDX67906 | Canola | extracellular | 80.87 | 54.4 |
| CDY11043 | Canola | cytosol | 76.51 | 54.16 |
| CDY33717 | Canola | cytosol | 30.2 | 45.23 |
| TraesCS4D01G148500.2 | Wheat | cytosol | 15.44 | 31.29 |
| CDY55536 | Canola | cytosol | 7.38 | 21.15 |
| CDX93958 | Canola | cytosol | 7.38 | 21.15 |
| CDX89151 | Canola | cytosol | 7.38 | 20.95 |
| CDY25120 | Canola | cytosol | 4.36 | 10.4 |
Protein Annotations
| MapMan:17.1.2.1.6 | Gene3D:3.30.1330.210 | GO:A0A078FH79 | UniProt:A0A078FH79 | EnsemblPlants:CDY11453 | ProteinID:CDY11453 |
| ProteinID:CDY11453.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0030529 |
| GO:GO:0042254 | GO:GO:1990904 | EnsemblPlantsGene:GSBRNA2T00049522001 | InterPro:IPR029064 | InterPro:IPR038524 | InterPro:L30e-like |
| PFAM:PF01248 | PRINTS:PR00881 | PRINTS:PR00882 | ScanProsite:PS01082 | PANTHER:PTHR23105 | PANTHER:PTHR23105:SF70 |
| InterPro:Ribosomal_L7A/L8 | InterPro:Ribosomal_L7A/L8_sf | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 | InterPro:Ribosomal_L7Ae/L8/Nhp2 | InterPro:Ribosomal_L7Ae_CS | SUPFAM:SSF55315 |
| UniParc:UPI0004EDF155 | SEG:seg | : | : | : | : |
Description
BnaA09g40190DBnaA09g40190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH79]
Coordinates
chrLK032011:-:434127..435723
Molecular Weight (calculated)
33952.3 Da
IEP (calculated)
10.726
GRAVY (calculated)
-0.562
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGPENYFCP TPKMKLKKKE CDKHETLNWS LSLPLSAVPS VAMAPKKGVK VVAKKKTEKV TNPLFERRPK QFGIGGALPP KKDLTRYIKW PKSIRLQRQK
101: RILKQRLKVP PALNQFTKTL DKNLATQLFK LLMKYRPEDK AAKKDRLLKK AQAEAEGKPS ESKKPIVVKY GLNHVTYLIE QNKAQLVVIA HDVDPIELVV
201: WLPALCRKME VPYCIVKGKS RLGTVVHQKT AACLCLTTVK NEDKLEFSKI LEAIKANFND KYEEYRKKWG GGIMGSKSQA KTKAKERVLA KEAAQRMN
101: RILKQRLKVP PALNQFTKTL DKNLATQLFK LLMKYRPEDK AAKKDRLLKK AQAEAEGKPS ESKKPIVVKY GLNHVTYLIE QNKAQLVVIA HDVDPIELVV
201: WLPALCRKME VPYCIVKGKS RLGTVVHQKT AACLCLTTVK NEDKLEFSKI LEAIKANFND KYEEYRKKWG GGIMGSKSQA KTKAKERVLA KEAAQRMN
001: MAPKKGVKVA AKKKTAEKVS NPLFERRPKQ FGIGGALPPK KDLSRYIKWP KSIRLQRQKR ILKQRLKVPP ALNQFTKTLD KNLATSLFKV LLKYRPEDKA
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN
Arabidopsis Description
RPL7AA60S ribosomal protein L7a-1 [Source:UniProtKB/Swiss-Prot;Acc:P49692]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.