CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019201.1-P	Field mustard	cytosol	100.0	100.0
CDX93955	Canola	cytosol	53.44	85.55
CDX83325	Canola	cytosol	55.11	85.29
CDX89154	Canola	cytosol	53.92	84.7
CDX95727	Canola	cytosol	55.34	83.51
CDY55535	Canola	extracellular	18.76	83.16
CDY66035	Canola	cytosol	51.07	82.69
CDX80121	Canola	cytosol	51.31	82.13
CDX76668	Canola	extracellular	54.87	81.91
KRH31699	Soybean	cytosol, nucleus	49.41	80.0
KRH24214	Soybean	nucleus	49.17	79.92
KRH29218	Soybean	endoplasmic reticulum, nucleus	49.17	79.92
KRH69083	Soybean	nucleus	49.17	79.62
CDY34328	Canola	nucleus	76.01	79.21
TraesCS7D01G262800.2	Wheat	cytosol	48.46	79.07
TraesCS7A01G261600.1	Wheat	cytosol, plastid	48.46	79.07
Zm00001d006100_P001	Maize	plasma membrane	48.46	79.07
TraesCS7B01G159700.1	Wheat	cytosol	48.22	78.68
Os08t0326400-01	Rice	cytosol	48.22	78.68
Zm00001d021061_P001	Maize	cytosol, mitochondrion, plasma membrane	48.22	78.68
Os09t0507800-01	Rice	nucleus, plasma membrane	48.22	78.68
Zm00001d031640_P001	Maize	mitochondrion	47.98	78.6
TraesCS5A01G288400.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	47.98	77.99
TraesCS5B01G287900.1	Wheat	cytosol	47.98	77.99
TraesCS5D01G296200.1	Wheat	cytosol	47.98	77.99
EER99158	Sorghum	cytosol	47.74	77.91
Os01t0924800-00	Rice	cytosol, golgi	29.22	77.85
GSMUA_Achr10P...	Banana	cytosol	48.93	77.15
CDY11453	Canola	cytosol	54.16	76.51
CDY03403	Canola	cytosol	73.87	76.04
HORVU7Hr1G054670.5	Barley	cytosol	48.69	75.93
CDY03061	Canola	extracellular	18.76	73.83
GSMUA_Achr11P...	Banana	cytosol	48.22	73.29
HORVU5Hr1G076700.2	Barley	cytosol	48.22	71.48
GSMUA_Achr3P03600_001	Banana	cytosol	47.51	69.69
CDX92662	Canola	cytosol	64.37	65.46
CDX92144	Canola	extracellular	50.12	65.12
EES03046	Sorghum	cytosol	10.21	63.24
CDY08962	Canola	endoplasmic reticulum, extracellular	15.91	62.62
KXG35979	Sorghum	cytosol, mitochondrion	48.69	61.93
KXG25835	Sorghum	cytosol	9.98	61.76
KRH15988	Soybean	cytosol	11.16	60.26
GSMUA_Achr6P21550_001	Banana	cytosol	49.17	59.65
CDY25121	Canola	cytosol	51.78	56.33
GSMUA_Achr6P14640_001	Banana	cytosol	49.88	55.26
CDX67906	Canola	extracellular	51.31	48.76
CDY33717	Canola	cytosol	20.67	43.72
TraesCS4D01G148500.2	Wheat	cytosol	11.4	32.65
CDX93958	Canola	cytosol	4.28	17.31
CDY55536	Canola	cytosol	4.28	17.31
CDX89151	Canola	cytosol	4.28	17.14
CDY25120	Canola	cytosol	3.09	10.4

Protein Annotations

MapMan:17.1.2.1.6	Gene3D:3.30.1330.210	GO:A0A078FG91	UniProt:A0A078FG91	EnsemblPlants:CDY11043	ProteinID:CDY11043
ProteinID:CDY11043.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0030529	GO:GO:0042254	GO:GO:1990904	EnsemblPlantsGene:GSBRNA2T00049000001	InterPro:IPR029064
InterPro:IPR038524	InterPro:L30e-like	PFAM:PF01248	PRINTS:PR00881	PRINTS:PR00882	ScanProsite:PS01082
PANTHER:PTHR23105	PANTHER:PTHR23105:SF70	InterPro:Ribosomal_L7A/L8	InterPro:Ribosomal_L7A/L8_sf	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	InterPro:Ribosomal_L7Ae/L8/Nhp2
InterPro:Ribosomal_L7Ae_CS	SUPFAM:SSF55315	TMHMM:TMhelix	UniParc:UPI000254104B	SEG:seg	:

Description

BnaA03g47020DBnaA03g47020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FG91]

Coordinates

chrLK032008:+:782523..787499

Molecular Weight (calculated)

48143.1 Da

IEP (calculated)

10.465

GRAVY (calculated)

-0.648

Length

421 amino acids

Sequence
(BLAST)

001: MEEKEENPHE RLKQKLSELE KVWTAMKEGK SSSAVSCITV EEALELVENS PRKLMISLQH DQDGPEAEMR SPYRRKLFHD SDDNDDDETR TTRLSHSTCW
101: SSNVMRAGDN SNNNKINKKH EKKKKKNRGS IVCVCVIVLL LWVLVLLLIN GFDQLSMNMN REIYSLAPKK GVKAVTKKKP EKVTNPLFER RPKQFGIGGA
201: LPPKKDLTRY IKWPKSIRLQ RQKRILKQRL KVPPALNQFT KTLDKNLATS LLKILLKYRP EDKAAKKERL LKKAQAEAEG KPVESKKPIV VKYGLNHVTY
301: LIEQNKAQLV VIAHDVDPIE LVVWLPALCR KMEVPYCIIK GKSRLGAIVH QKTAACLCLT TVKNEDKMEF SKVLEAIKAN FNDKYEENRK KWGGGIMGSK
401: SQAKTKAKER VLAKEAAQRM N

Best Arabidopsis Sequence Match ( AT3G62870.1 )
(BLAST)

001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN

Arabidopsis Description

RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.