Factsheet for Bra019201.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11043	Canola	cytosol	100.0	100.0
Bra004442.1-P	Field mustard	cytosol	53.44	87.89
Bra014387.1-P	Field mustard	cytosol	53.21	87.5
Bra000455.1-P	Field mustard	cytosol	55.11	85.29
Solyc10g018810.1.1	Tomato	cytosol	15.44	84.42
PGSC0003DMT400008912	Potato	cytosol, plastid	50.83	83.92
Solyc06g064470.2.1	Tomato	nucleus	51.31	83.72
PGSC0003DMT400057989	Potato	cytosol	51.31	83.72
Solyc06g064460.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	51.31	83.72
Solyc06g050120.2.1	Tomato	nucleus	51.07	83.01
Solyc01g097760.2.1	Tomato	nucleus	50.83	82.95
KRH31699	Soybean	cytosol, nucleus	49.41	80.0
KRH24214	Soybean	nucleus	49.17	79.92
KRH29218	Soybean	endoplasmic reticulum, nucleus	49.17	79.92
KRH69083	Soybean	nucleus	49.17	79.62
TraesCS7A01G261600.1	Wheat	cytosol, plastid	48.46	79.07
TraesCS7D01G262800.2	Wheat	cytosol	48.46	79.07
Zm00001d006100_P001	Maize	plasma membrane	48.46	79.07
Bra013849.1-P	Field mustard	cytosol	75.77	78.96
TraesCS7B01G159700.1	Wheat	cytosol	48.22	78.68
Zm00001d021061_P001	Maize	cytosol, mitochondrion, plasma membrane	48.22	78.68
Os09t0507800-01	Rice	nucleus, plasma membrane	48.22	78.68
Os08t0326400-01	Rice	cytosol	48.22	78.68
Zm00001d031640_P001	Maize	mitochondrion	47.98	78.6
TraesCS5D01G296200.1	Wheat	cytosol	47.98	77.99
TraesCS5B01G287900.1	Wheat	cytosol	47.98	77.99
TraesCS5A01G288400.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	47.98	77.99
EER99158	Sorghum	cytosol	47.74	77.91
Os01t0924800-00	Rice	cytosol, golgi	29.22	77.85
GSMUA_Achr10P...	Banana	cytosol	48.93	77.15
PGSC0003DMT400083237	Potato	cytosol	45.61	77.11
Solyc01g020290.1.1	Tomato	cytosol	9.74	75.93
HORVU7Hr1G054670.5	Barley	cytosol	48.69	75.93
GSMUA_Achr11P...	Banana	cytosol	48.22	73.29
PGSC0003DMT400015879	Potato	cytosol	25.18	72.11
HORVU5Hr1G076700.2	Barley	cytosol	48.22	71.48
GSMUA_Achr3P03600_001	Banana	cytosol	47.51	69.69
VIT_14s0083g00970.t01	Wine grape	plastid	48.46	67.77
EES03046	Sorghum	cytosol	10.21	63.24
CDY08962	Canola	endoplasmic reticulum, extracellular	15.91	62.62
Solyc11g042870.1.1	Tomato	cytosol	13.06	62.5
KXG35979	Sorghum	cytosol, mitochondrion	48.69	61.93
KXG25835	Sorghum	cytosol	9.98	61.76
KRH15988	Soybean	cytosol	11.16	60.26
GSMUA_Achr6P21550_001	Banana	cytosol	49.17	59.65
GSMUA_Achr6P14640_001	Banana	cytosol	49.88	55.26
Bra003512.1-P	Field mustard	cytosol	48.69	50.62
TraesCS4D01G148500.2	Wheat	cytosol	11.4	32.65

Protein Annotations

MapMan:17.1.2.1.6	Gene3D:3.30.1330.210	EnsemblPlantsGene:Bra019201	EnsemblPlants:Bra019201.1	EnsemblPlants:Bra019201.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030529
GO:GO:0042254	GO:GO:1990904	InterPro:IPR029064	InterPro:IPR038524	InterPro:L30e-like	UniProt:M4DRQ8
PFAM:PF01248	PRINTS:PR00881	PRINTS:PR00882	ScanProsite:PS01082	PANTHER:PTHR23105	PANTHER:PTHR23105:SF70
InterPro:Ribosomal_L7A/L8	InterPro:Ribosomal_L7A/L8_sf	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	InterPro:Ribosomal_L7Ae/L8/Nhp2	InterPro:Ribosomal_L7Ae_CS	SUPFAM:SSF55315
TMHMM:TMhelix	UniParc:UPI000254104B	SEG:seg	:	:	:

Description

AT2G47610 (E=7e-108) | 60S ribosomal protein L7A (RPL7aA)

Coordinates

chrA03:+:25722762..25726271

Molecular Weight (calculated)

48143.1 Da

IEP (calculated)

10.465

GRAVY (calculated)

-0.648

Length

421 amino acids

Sequence
(BLAST)

001: MEEKEENPHE RLKQKLSELE KVWTAMKEGK SSSAVSCITV EEALELVENS PRKLMISLQH DQDGPEAEMR SPYRRKLFHD SDDNDDDETR TTRLSHSTCW
101: SSNVMRAGDN SNNNKINKKH EKKKKKNRGS IVCVCVIVLL LWVLVLLLIN GFDQLSMNMN REIYSLAPKK GVKAVTKKKP EKVTNPLFER RPKQFGIGGA
201: LPPKKDLTRY IKWPKSIRLQ RQKRILKQRL KVPPALNQFT KTLDKNLATS LLKILLKYRP EDKAAKKERL LKKAQAEAEG KPVESKKPIV VKYGLNHVTY
301: LIEQNKAQLV VIAHDVDPIE LVVWLPALCR KMEVPYCIIK GKSRLGAIVH QKTAACLCLT TVKNEDKMEF SKVLEAIKAN FNDKYEENRK KWGGGIMGSK
401: SQAKTKAKER VLAKEAAQRM N

Best Arabidopsis Sequence Match ( AT3G62870.1 )
(BLAST)

001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN

Arabidopsis Description

RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.