CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH12155
KRH37161

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47610.1	KRH12155	AT1G30860.1	21798944
AT2G47610.1	KRH37161	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24214	Soybean	nucleus	89.74	27.03
KRH29218	Soybean	endoplasmic reticulum, nucleus	88.46	26.64
Os01t0924800-00	Rice	cytosol, golgi	50.0	24.68
Os08t0326400-01	Rice	cytosol	80.77	24.42
TraesCS7D01G262800.2	Wheat	cytosol	80.77	24.42
Os09t0507800-01	Rice	nucleus, plasma membrane	80.77	24.42
GSMUA_Achr10P...	Banana	cytosol	83.33	24.34
EER99158	Sorghum	cytosol	79.49	24.03
TraesCS7A01G261600.1	Wheat	cytosol, plastid	79.49	24.03
TraesCS7B01G159700.1	Wheat	cytosol	79.49	24.03
Zm00001d006100_P001	Maize	plasma membrane	79.49	24.03
Zm00001d021061_P001	Maize	cytosol, mitochondrion, plasma membrane	79.49	24.03
TraesCS5D01G296200.1	Wheat	cytosol	79.49	23.94
TraesCS5B01G287900.1	Wheat	cytosol	79.49	23.94
TraesCS5A01G288400.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	79.49	23.94
KRH69083	Soybean	nucleus	79.49	23.85
KRH31699	Soybean	cytosol, nucleus	79.49	23.85
Zm00001d031640_P001	Maize	mitochondrion	78.21	23.74
Bra004442.1-P	Field mustard	cytosol	76.92	23.44
HORVU7Hr1G054670.5	Barley	cytosol	79.49	22.96
AT2G47610.1	Thale cress	cytosol	75.64	22.96
GSMUA_Achr11P...	Banana	cytosol	80.77	22.74
CDY66035	Canola	cytosol	75.64	22.69
AT3G62870.1	Thale cress	cytosol	74.36	22.66
Bra014387.1-P	Field mustard	cytosol	74.36	22.66
CDX80121	Canola	cytosol	75.64	22.43
CDX93955	Canola	cytosol	75.64	22.43
GSMUA_Achr3P03600_001	Banana	cytosol	82.05	22.3
HORVU5Hr1G076700.2	Barley	cytosol	79.49	21.83
CDX89154	Canola	cytosol	74.36	21.64
VIT_14s0068g01640.t01	Wine grape	mitochondrion	78.21	20.33
Bra000455.1-P	Field mustard	cytosol	70.51	20.22
CDX83325	Canola	cytosol	70.51	20.22
CDX76668	Canola	extracellular	73.08	20.21
PGSC0003DMT400083237	Potato	cytosol	64.1	20.08
PGSC0003DMT400057989	Potato	cytosol	65.38	19.77
CDY11453	Canola	cytosol	74.36	19.46
Solyc01g097760.2.1	Tomato	nucleus	64.1	19.38
Solyc06g064470.2.1	Tomato	nucleus	64.1	19.38
CDX95727	Canola	cytosol	69.23	19.35
Solyc06g050120.2.1	Tomato	nucleus	64.1	19.3
PGSC0003DMT400008912	Potato	cytosol, plastid	62.82	19.22
Solyc06g064460.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	62.82	18.99
GSMUA_Achr6P21550_001	Banana	cytosol	83.33	18.73
KXG35979	Sorghum	cytosol, mitochondrion	79.49	18.73
CDY08962	Canola	endoplasmic reticulum, extracellular	25.64	18.69
CDX92144	Canola	extracellular	74.36	17.9
GSMUA_Achr6P14640_001	Banana	cytosol	83.33	17.11
CDY25121	Canola	cytosol	75.64	15.25
PGSC0003DMT400015879	Potato	cytosol	28.21	14.97
CDY55535	Canola	extracellular	17.95	14.74
CDY34328	Canola	nucleus	70.51	13.61
Bra013849.1-P	Field mustard	cytosol	70.51	13.61
CDY03403	Canola	cytosol	70.51	13.45
CDX67906	Canola	extracellular	75.64	13.32
Bra003512.1-P	Field mustard	cytosol	62.82	12.1
Solyc10g018810.1.1	Tomato	cytosol	11.54	11.69
CDY33717	Canola	cytosol	29.49	11.56
CDX92662	Canola	cytosol	60.26	11.35
CDY11043	Canola	cytosol	60.26	11.16
Bra019201.1-P	Field mustard	cytosol	60.26	11.16
TraesCS4D01G148500.2	Wheat	cytosol	16.67	8.84
Solyc11g042870.1.1	Tomato	cytosol	7.69	6.82
CDY55536	Canola	cytosol	8.97	6.73
CDX93958	Canola	cytosol	8.97	6.73
CDX89151	Canola	cytosol	8.97	6.67
CDY03061	Canola	extracellular	5.13	3.74
Solyc01g020290.1.1	Tomato	cytosol	2.56	3.7
KXG25835	Sorghum	cytosol	2.56	2.94
EES03046	Sorghum	cytosol	2.56	2.94
CDY25120	Canola	cytosol	2.56	1.6

Protein Annotations

EMBL:ACUP02008747	EnsemblPlants:KRH15988	EnsemblPlantsGene:GLYMA_14G124500	Gene3D:3.30.1330.210	InterPro:IPR029064	InterPro:IPR038524
InterPro:L30e-like	InterPro:Ribosomal_L7A/L8_sf	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	InterPro:Ribosomal_L7Ae/L8/Nhp2	PANTHER:PTHR23105	PANTHER:PTHR23105:SF70
PFAM:PF01248	PRINTS:PR00881	ProteinID:KRH15988	ProteinID:KRH15988.1	SUPFAM:SSF55315	UniParc:UPI000296E1A2
UniProt:K7M7A6	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:19084111..19089981

Molecular Weight (calculated)

8744.1 Da

IEP (calculated)

10.765

GRAVY (calculated)

-0.183

Length

78 amino acids

Sequence
(BLAST)

1: MAPKRGGKAP TLAAKKKPEK VSNPLFEKRP KQVVVIAHDV DPIELVVWLP ALYRKMEIPY CIVKGKARLG TRIPELLT

Best Arabidopsis Sequence Match ( AT2G47610.1 )
(BLAST)

001: MAPKKGVKVA AKKKTAEKVS NPLFERRPKQ FGIGGALPPK KDLSRYIKWP KSIRLQRQKR ILKQRLKVPP ALNQFTKTLD KNLATSLFKV LLKYRPEDKA
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN

Arabidopsis Description

RPL7AA60S ribosomal protein L7a-1 [Source:UniProtKB/Swiss-Prot;Acc:P49692]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.