Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55535 | Canola | extracellular | 34.22 | 94.74 |
| AT3G62870.1 | Thale cress | cytosol | 91.64 | 94.14 |
| CDX89154 | Canola | cytosol | 95.44 | 93.66 |
| CDY66035 | Canola | cytosol | 91.25 | 92.31 |
| CDX80121 | Canola | cytosol | 91.25 | 91.25 |
| CDX83325 | Canola | cytosol | 93.54 | 90.44 |
| CDX76668 | Canola | extracellular | 95.06 | 88.65 |
| CDX95727 | Canola | cytosol | 92.78 | 87.46 |
| KRH31699 | Soybean | cytosol, nucleus | 83.65 | 84.62 |
| CDY11453 | Canola | cytosol | 95.82 | 84.56 |
| KRH29218 | Soybean | endoplasmic reticulum, nucleus | 83.27 | 84.56 |
| KRH24214 | Soybean | nucleus | 83.27 | 84.56 |
| KRH69083 | Soybean | nucleus | 83.27 | 84.23 |
| TraesCS7A01G261600.1 | Wheat | cytosol, plastid | 82.51 | 84.11 |
| TraesCS7D01G262800.2 | Wheat | cytosol | 82.51 | 84.11 |
| Zm00001d006100_P001 | Maize | plasma membrane | 82.51 | 84.11 |
| TraesCS7B01G159700.1 | Wheat | cytosol | 82.13 | 83.72 |
| Os09t0507800-01 | Rice | nucleus, plasma membrane | 82.13 | 83.72 |
| Os08t0326400-01 | Rice | cytosol | 82.13 | 83.72 |
| Zm00001d021061_P001 | Maize | cytosol, mitochondrion, plasma membrane | 82.13 | 83.72 |
| Zm00001d031640_P001 | Maize | mitochondrion | 81.37 | 83.27 |
| EER99158 | Sorghum | cytosol | 81.37 | 82.95 |
| TraesCS5A01G288400.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 81.37 | 82.63 |
| TraesCS5B01G287900.1 | Wheat | cytosol | 81.37 | 82.63 |
| TraesCS5D01G296200.1 | Wheat | cytosol | 81.37 | 82.63 |
| Os01t0924800-00 | Rice | cytosol, golgi | 49.05 | 81.65 |
| HORVU7Hr1G054670.5 | Barley | cytosol | 82.51 | 80.37 |
| GSMUA_Achr10P... | Banana | cytosol | 80.23 | 79.03 |
| GSMUA_Achr11P... | Banana | cytosol | 80.23 | 76.17 |
| HORVU5Hr1G076700.2 | Barley | cytosol | 81.75 | 75.7 |
| KRH15988 | Soybean | cytosol | 22.43 | 75.64 |
| GSMUA_Achr3P03600_001 | Banana | cytosol | 79.47 | 72.82 |
| CDX92144 | Canola | extracellular | 89.35 | 72.53 |
| CDY03061 | Canola | extracellular | 27.38 | 67.29 |
| EES03046 | Sorghum | cytosol | 16.73 | 64.71 |
| KXG25835 | Sorghum | cytosol | 16.73 | 64.71 |
| KXG35979 | Sorghum | cytosol, mitochondrion | 81.37 | 64.65 |
| CDY25121 | Canola | cytosol | 92.4 | 62.79 |
| CDY08962 | Canola | endoplasmic reticulum, extracellular | 24.71 | 60.75 |
| GSMUA_Achr6P21550_001 | Banana | cytosol | 79.85 | 60.52 |
| CDY34328 | Canola | nucleus | 89.73 | 58.42 |
| CDY03403 | Canola | cytosol | 90.11 | 57.95 |
| GSMUA_Achr6P14640_001 | Banana | cytosol | 81.37 | 56.32 |
| CDX92662 | Canola | cytosol | 85.17 | 54.11 |
| CDX67906 | Canola | extracellular | 90.11 | 53.5 |
| CDY11043 | Canola | cytosol | 85.55 | 53.44 |
| CDY33717 | Canola | cytosol | 33.84 | 44.72 |
| TraesCS4D01G148500.2 | Wheat | cytosol | 17.49 | 31.29 |
| CDY55536 | Canola | cytosol | 7.98 | 20.19 |
| CDX93958 | Canola | cytosol | 7.98 | 20.19 |
| CDX89151 | Canola | cytosol | 7.98 | 20.0 |
| CDY25120 | Canola | cytosol | 4.56 | 9.6 |
Protein Annotations
| MapMan:17.1.2.1.6 | Gene3D:3.30.1330.210 | GO:A0A078DXA4 | EnsemblPlants:CDX93955 | ProteinID:CDX93955 | ProteinID:CDX93955.1 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0042254 | GO:GO:1990904 | EnsemblPlantsGene:GSBRNA2T00156787001 | InterPro:IPR029064 |
| InterPro:IPR038524 | InterPro:L30e-like | PFAM:PF01248 | PRINTS:PR00881 | PRINTS:PR00882 | ScanProsite:PS01082 |
| PANTHER:PTHR23105 | PANTHER:PTHR23105:SF70 | InterPro:Ribosomal_L7A/L8 | InterPro:Ribosomal_L7A/L8_sf | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 | InterPro:Ribosomal_L7Ae/L8/Nhp2 |
| InterPro:Ribosomal_L7Ae_CS | SUPFAM:SSF55315 | UniParc:UPI0004EDE902 | SEG:seg | : | : |
Description
BnaC04g21140D
Coordinates
chrLK031878:+:902805..904350
Molecular Weight (calculated)
30074.5 Da
IEP (calculated)
10.832
GRAVY (calculated)
-0.525
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MFCLFLNFAP KRGVKVAAKK KTEKVTNPLF ERRPKQFGIG GALPPKKDLT RYIKWPKSIR LQRQKRILKQ RLKVPPALNQ FTKTLDKNLA TQLFKLLMKY
101: RPEDKAAKKD RLLKKAQAEA DGKPSESKKP IVVKYGLNHV TYLIEQNKAQ LVVIAHDVDP IELVVWLPAL CRKMEVPYCI VKGKSRLGTV VHQKTAACLC
201: LTTVKNEDKL EFSKILEAIK ANFNDKYEEY RKKWGGGIMG SKSQAKTKAK ERVLAKEAAQ RMN
101: RPEDKAAKKD RLLKKAQAEA DGKPSESKKP IVVKYGLNHV TYLIEQNKAQ LVVIAHDVDP IELVVWLPAL CRKMEVPYCI VKGKSRLGTV VHQKTAACLC
201: LTTVKNEDKL EFSKILEAIK ANFNDKYEEY RKKWGGGIMG SKSQAKTKAK ERVLAKEAAQ RMN
001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN
Arabidopsis Description
RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.