Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66035 | Canola | cytosol | 94.3 | 95.38 |
| CDY55535 | Canola | extracellular | 34.22 | 94.74 |
| Bra004442.1-P | Field mustard | cytosol | 92.02 | 94.53 |
| CDX93955 | Canola | cytosol | 91.25 | 91.25 |
| CDX89154 | Canola | cytosol | 92.78 | 91.04 |
| AT3G62870.1 | Thale cress | cytosol | 88.59 | 91.02 |
| CDX83325 | Canola | cytosol | 89.35 | 86.4 |
| CDX76668 | Canola | extracellular | 91.25 | 85.11 |
| CDX95727 | Canola | cytosol | 88.97 | 83.87 |
| Os01t0924800-00 | Rice | cytosol, golgi | 49.43 | 82.28 |
| CDY11453 | Canola | cytosol | 92.02 | 81.21 |
| KRH31699 | Soybean | cytosol, nucleus | 80.23 | 81.15 |
| KRH69083 | Soybean | nucleus | 79.85 | 80.77 |
| KRH24214 | Soybean | nucleus | 79.47 | 80.69 |
| KRH29218 | Soybean | endoplasmic reticulum, nucleus | 79.47 | 80.69 |
| TraesCS7D01G262800.2 | Wheat | cytosol | 79.09 | 80.62 |
| TraesCS7B01G159700.1 | Wheat | cytosol | 78.71 | 80.23 |
| TraesCS7A01G261600.1 | Wheat | cytosol, plastid | 78.71 | 80.23 |
| Zm00001d006100_P001 | Maize | plasma membrane | 78.71 | 80.23 |
| Os09t0507800-01 | Rice | nucleus, plasma membrane | 78.33 | 79.84 |
| Os08t0326400-01 | Rice | cytosol | 78.33 | 79.84 |
| Zm00001d021061_P001 | Maize | cytosol, mitochondrion, plasma membrane | 78.33 | 79.84 |
| Zm00001d031640_P001 | Maize | mitochondrion | 77.57 | 79.38 |
| TraesCS5D01G296200.1 | Wheat | cytosol | 77.95 | 79.15 |
| TraesCS5B01G287900.1 | Wheat | cytosol | 77.95 | 79.15 |
| TraesCS5A01G288400.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 77.95 | 79.15 |
| EER99158 | Sorghum | cytosol | 77.57 | 79.07 |
| HORVU7Hr1G054670.5 | Barley | cytosol | 79.09 | 77.04 |
| GSMUA_Achr10P... | Banana | cytosol | 77.95 | 76.78 |
| KRH15988 | Soybean | cytosol | 22.43 | 75.64 |
| GSMUA_Achr11P... | Banana | cytosol | 77.57 | 73.65 |
| HORVU5Hr1G076700.2 | Barley | cytosol | 78.33 | 72.54 |
| CDX92144 | Canola | extracellular | 85.55 | 69.44 |
| GSMUA_Achr3P03600_001 | Banana | cytosol | 75.67 | 69.34 |
| CDY03061 | Canola | extracellular | 27.38 | 67.29 |
| KXG25835 | Sorghum | cytosol | 16.73 | 64.71 |
| EES03046 | Sorghum | cytosol | 16.73 | 64.71 |
| CDY08962 | Canola | endoplasmic reticulum, extracellular | 25.86 | 63.55 |
| KXG35979 | Sorghum | cytosol, mitochondrion | 77.57 | 61.63 |
| CDY25121 | Canola | cytosol | 88.97 | 60.47 |
| GSMUA_Achr6P21550_001 | Banana | cytosol | 76.81 | 58.21 |
| CDY34328 | Canola | nucleus | 86.69 | 56.44 |
| CDY03403 | Canola | cytosol | 87.45 | 56.23 |
| GSMUA_Achr6P14640_001 | Banana | cytosol | 77.95 | 53.95 |
| CDX67906 | Canola | extracellular | 86.69 | 51.47 |
| CDX92662 | Canola | cytosol | 80.99 | 51.45 |
| CDY11043 | Canola | cytosol | 82.13 | 51.31 |
| CDY33717 | Canola | cytosol | 29.66 | 39.2 |
| TraesCS4D01G148500.2 | Wheat | cytosol | 17.49 | 31.29 |
| CDX93958 | Canola | cytosol | 7.22 | 18.27 |
| CDY55536 | Canola | cytosol | 7.22 | 18.27 |
| CDX89151 | Canola | cytosol | 7.22 | 18.1 |
| CDY25120 | Canola | cytosol | 4.94 | 10.4 |
Protein Annotations
| MapMan:17.1.2.1.6 | Gene3D:3.30.1330.210 | GO:A0A078CSI5 | EnsemblPlants:CDX80121 | ProteinID:CDX80121 | ProteinID:CDX80121.1 |
| ncoils:Coil | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0042254 | GO:GO:1990904 | EnsemblPlantsGene:GSBRNA2T00133026001 |
| InterPro:IPR029064 | InterPro:IPR038524 | InterPro:L30e-like | PFAM:PF01248 | PRINTS:PR00881 | PRINTS:PR00882 |
| ScanProsite:PS01082 | PANTHER:PTHR23105 | PANTHER:PTHR23105:SF70 | InterPro:Ribosomal_L7A/L8 | InterPro:Ribosomal_L7A/L8_sf | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 |
| InterPro:Ribosomal_L7Ae/L8/Nhp2 | InterPro:Ribosomal_L7Ae_CS | SUPFAM:SSF55315 | UniParc:UPI0004EDB770 | SEG:seg | : |
Description
BnaA05g00350D
Coordinates
chrLK031819:+:1978982..1983239
Molecular Weight (calculated)
29824.8 Da
IEP (calculated)
10.865
GRAVY (calculated)
-0.613
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDDSSTNTT SFGVQHRRAT MAPKKGVKVA AKKKTEKVTN PLFERRPKQF GIGGALPPKK DLTRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK
101: NLATQLFKKD RLLKKAQAEA EGKPSESKKP IVVKYGLNHV TYLIEQNKAQ LVVIAHDVDP IELVVWLPAL CRKMEVPYCI VKGKSRLGTV VHQKTAACLC
201: LTTVKNEDKL EFSKILEAIK ANFNDKYEEY RKKWGGGIMG SKSQAKTKAK ERVLAKEAAQ RMN
101: NLATQLFKKD RLLKKAQAEA EGKPSESKKP IVVKYGLNHV TYLIEQNKAQ LVVIAHDVDP IELVVWLPAL CRKMEVPYCI VKGKSRLGTV VHQKTAACLC
201: LTTVKNEDKL EFSKILEAIK ANFNDKYEEY RKKWGGGIMG SKSQAKTKAK ERVLAKEAAQ RMN
001: MAPKKGVKVA AKKKTAEKVS NPLFERRPKQ FGIGGALPPK KDLSRYIKWP KSIRLQRQKR ILKQRLKVPP ALNQFTKTLD KNLATSLFKV LLKYRPEDKA
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN
Arabidopsis Description
RPL7AA60S ribosomal protein L7a-1 [Source:UniProtKB/Swiss-Prot;Acc:P49692]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.