Factsheet for AT3G62870.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G47610.1	Thale cress	cytosol	96.48	96.11
Bra004442.1-P	Field mustard	cytosol	94.92	94.92
Bra014387.1-P	Field mustard	cytosol	94.53	94.53
CDX93955	Canola	cytosol	94.14	91.64
CDX89154	Canola	cytosol	94.92	90.67
CDY66035	Canola	cytosol	91.02	89.62
CDX80121	Canola	cytosol	91.02	88.59
CDX76668	Canola	extracellular	94.92	86.17
TraesCS7A01G261600.1	Wheat	cytosol, plastid	85.16	84.5
TraesCS7D01G262800.2	Wheat	cytosol	85.16	84.5
KRH29218	Soybean	endoplasmic reticulum, nucleus	85.16	84.17
KRH24214	Soybean	nucleus	85.16	84.17
TraesCS7B01G159700.1	Wheat	cytosol	84.77	84.11
KRH31699	Soybean	cytosol, nucleus	85.16	83.85
Zm00001d006100_P001	Maize	plasma membrane	84.38	83.72
KRH69083	Soybean	nucleus	84.77	83.46
TraesCS5D01G296200.1	Wheat	cytosol	84.38	83.4
TraesCS5B01G287900.1	Wheat	cytosol	84.38	83.4
TraesCS5A01G288400.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	84.38	83.4
Zm00001d021061_P001	Maize	cytosol, mitochondrion, plasma membrane	83.98	83.33
EER99158	Sorghum	cytosol	83.98	83.33
Os09t0507800-01	Rice	nucleus, plasma membrane	83.98	83.33
Os08t0326400-01	Rice	cytosol	83.98	83.33
Zm00001d031640_P001	Maize	mitochondrion	83.59	83.27
Os01t0924800-00	Rice	cytosol, golgi	50.39	81.65
CDY11453	Canola	cytosol	94.92	81.54
GSMUA_Achr10P...	Banana	cytosol	83.98	80.52
HORVU7Hr1G054670.5	Barley	cytosol	84.77	80.37
PGSC0003DMT400057989	Potato	cytosol	79.69	79.07
Solyc01g097760.2.1	Tomato	nucleus	79.3	78.68
Solyc06g064470.2.1	Tomato	nucleus	78.91	78.29
Solyc06g064460.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	78.52	77.91
Solyc06g050120.2.1	Tomato	nucleus	78.52	77.61
GSMUA_Achr11P...	Banana	cytosol	83.59	77.26
PGSC0003DMT400008912	Potato	cytosol, plastid	76.56	76.86
HORVU5Hr1G076700.2	Barley	cytosol	84.77	76.41
KRH15988	Soybean	cytosol	22.66	74.36
Solyc10g018810.1.1	Tomato	cytosol	22.27	74.03
GSMUA_Achr3P03600_001	Banana	cytosol	81.64	72.82
VIT_14s0083g00970.t01	Wine grape	plastid	85.16	72.43
PGSC0003DMT400015879	Potato	cytosol	41.41	72.11
PGSC0003DMT400083237	Potato	cytosol	69.92	71.89
CDX92144	Canola	extracellular	88.67	70.06
Solyc01g020290.1.1	Tomato	cytosol	14.06	66.67
KXG35979	Sorghum	cytosol, mitochondrion	83.98	64.95
KXG25835	Sorghum	cytosol	16.8	63.24
EES03046	Sorghum	cytosol	16.8	63.24
Solyc11g042870.1.1	Tomato	cytosol	21.09	61.36
GSMUA_Achr6P21550_001	Banana	cytosol	82.81	61.1
CDY25121	Canola	cytosol	91.41	60.47
GSMUA_Achr6P14640_001	Banana	cytosol	84.38	56.84
Bra003512.1-P	Field mustard	cytosol	85.55	54.07
CDX67906	Canola	extracellular	89.06	51.47
CDY33717	Canola	cytosol	32.81	42.21
TraesCS4D01G148500.2	Wheat	cytosol	17.97	31.29

Protein Annotations

MapMan:17.1.2.1.6	Gene3D:3.30.1330.210	EntrezGene:825462	UniProt:A0A178V9A8	ProteinID:AEE80404.1	ArrayExpress:AT3G62870
EnsemblPlantsGene:AT3G62870	RefSeq:AT3G62870	TAIR:AT3G62870	RefSeq:AT3G62870-TAIR-G	EnsemblPlants:AT3G62870.1	TAIR:AT3G62870.1
EMBL:AY052264	EMBL:AY060519	EMBL:AY062758	EMBL:AY086353	EMBL:AY114667	ProteinID:CAB83137.1
GO:GO:0000470	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0005829	GO:GO:0005840	GO:GO:0006139	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0019538	GO:GO:0022625
GO:GO:0022626	GO:GO:0030529	GO:GO:0042254	GO:GO:0042788	GO:GO:1990904	InterPro:IPR029064
InterPro:IPR038524	InterPro:L30e-like	RefSeq:NP_191846.1	ProteinID:OAP02394.1	PFAM:PF01248	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00881	PRINTS:PR00882	ScanProsite:PS01082	PANTHER:PTHR23105	PANTHER:PTHR23105:SF70
UniProt:Q9LZH9	InterPro:Ribosomal_L7A/L8	InterPro:Ribosomal_L7A/L8_sf	InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45	InterPro:Ribosomal_L7Ae/L8/Nhp2	InterPro:Ribosomal_L7Ae_CS
SUPFAM:SSF55315	UniParc:UPI000009F435	SEG:seg	:	:	:

Description

RPL7AB60S ribosomal protein L7a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZH9]

Coordinates

chr3:-:23242561..23244397

Molecular Weight (calculated)

29036.1 Da

IEP (calculated)

10.868

GRAVY (calculated)

-0.568

Length

256 amino acids

Sequence
(BLAST)

001: MAPKKGVKVA SKKKPEKVTN PLFERRPKQF GIGGALPPKK DLSRYIKWPK SIRLQRQKRI LKQRLKVPPA LNQFTKTLDK NLATSLFKIL LKYRPEDKAA
101: KKERLLNKAQ AEAEGKPAES KKPIVVKYGL NHVTYLIEQN KAQLVVIAHD VDPIELVVWL PALCRKMEVP YCIVKGKSRL GAVVHQKTAA ALCLTTVKNE
201: DKLEFSKILE AIKANFNDKY EEYRKKWGGG IMGSKSQAKT KAKERVIAKE AAQRMN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.