Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G62870.1 | Thale cress | cytosol | 96.11 | 96.48 |
| Bra000455.1-P | Field mustard | cytosol | 95.72 | 90.44 |
| CDX83325 | Canola | cytosol | 95.72 | 90.44 |
| CDX95727 | Canola | cytosol | 95.33 | 87.81 |
| KRH24214 | Soybean | nucleus | 85.6 | 84.94 |
| TraesCS7A01G261600.1 | Wheat | cytosol, plastid | 85.21 | 84.88 |
| TraesCS7D01G262800.2 | Wheat | cytosol | 85.21 | 84.88 |
| TraesCS5D01G296200.1 | Wheat | cytosol | 85.21 | 84.56 |
| TraesCS5B01G287900.1 | Wheat | cytosol | 85.21 | 84.56 |
| TraesCS5A01G288400.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 85.21 | 84.56 |
| TraesCS7B01G159700.1 | Wheat | cytosol | 84.82 | 84.5 |
| KRH31699 | Soybean | cytosol, nucleus | 85.21 | 84.23 |
| KRH29218 | Soybean | endoplasmic reticulum, nucleus | 84.82 | 84.17 |
| Zm00001d006100_P001 | Maize | plasma membrane | 84.44 | 84.11 |
| EER99158 | Sorghum | cytosol | 84.44 | 84.11 |
| KRH69083 | Soybean | nucleus | 84.82 | 83.85 |
| Os09t0507800-01 | Rice | nucleus, plasma membrane | 84.05 | 83.72 |
| Zm00001d021061_P001 | Maize | cytosol, mitochondrion, plasma membrane | 84.05 | 83.72 |
| Os08t0326400-01 | Rice | cytosol | 84.05 | 83.72 |
| Zm00001d031640_P001 | Maize | mitochondrion | 83.66 | 83.66 |
| Os01t0924800-00 | Rice | cytosol, golgi | 50.58 | 82.28 |
| GSMUA_Achr10P... | Banana | cytosol | 84.05 | 80.9 |
| HORVU7Hr1G054670.5 | Barley | cytosol | 84.82 | 80.74 |
| PGSC0003DMT400057989 | Potato | cytosol | 80.54 | 80.23 |
| Solyc01g097760.2.1 | Tomato | nucleus | 80.16 | 79.84 |
| Solyc06g064470.2.1 | Tomato | nucleus | 79.77 | 79.46 |
| Solyc06g050120.2.1 | Tomato | nucleus | 79.77 | 79.15 |
| Solyc06g064460.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 79.38 | 79.07 |
| PGSC0003DMT400008912 | Potato | cytosol, plastid | 77.43 | 78.04 |
| HORVU5Hr1G076700.2 | Barley | cytosol | 85.6 | 77.46 |
| GSMUA_Achr11P... | Banana | cytosol | 83.27 | 77.26 |
| KRH15988 | Soybean | cytosol | 22.96 | 75.64 |
| PGSC0003DMT400015879 | Potato | cytosol | 42.8 | 74.83 |
| GSMUA_Achr3P03600_001 | Banana | cytosol | 81.71 | 73.17 |
| PGSC0003DMT400083237 | Potato | cytosol | 70.82 | 73.09 |
| Solyc10g018810.1.1 | Tomato | cytosol | 21.79 | 72.73 |
| VIT_14s0083g00970.t01 | Wine grape | plastid | 84.44 | 72.09 |
| Solyc01g020290.1.1 | Tomato | cytosol | 14.01 | 66.67 |
| KXG35979 | Sorghum | cytosol, mitochondrion | 84.44 | 65.56 |
| EES03046 | Sorghum | cytosol | 16.73 | 63.24 |
| KXG25835 | Sorghum | cytosol | 16.73 | 63.24 |
| Solyc11g042870.1.1 | Tomato | cytosol | 21.4 | 62.5 |
| GSMUA_Achr6P21550_001 | Banana | cytosol | 82.88 | 61.38 |
| GSMUA_Achr6P14640_001 | Banana | cytosol | 84.44 | 57.11 |
| TraesCS4D01G148500.2 | Wheat | cytosol | 17.51 | 30.61 |
Protein Annotations
| MapMan:17.1.2.1.6 | Gene3D:3.30.1330.210 | EntrezGene:819374 | UniProt:A0A178VV73 | ProteinID:AAC62850.1 | ProteinID:AEC10864.1 |
| EMBL:AF385719 | ArrayExpress:AT2G47610 | EnsemblPlantsGene:AT2G47610 | RefSeq:AT2G47610 | TAIR:AT2G47610 | RefSeq:AT2G47610-TAIR-G |
| EnsemblPlants:AT2G47610.1 | TAIR:AT2G47610.1 | EMBL:AY052674 | EMBL:AY088386 | Unigene:At.23347 | EMBL:BT000500 |
| GO:GO:0000470 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0022625 | GO:GO:0022626 |
| GO:GO:0030529 | GO:GO:0042254 | GO:GO:0042788 | GO:GO:1990904 | InterPro:IPR029064 | InterPro:IPR038524 |
| InterPro:L30e-like | RefSeq:NP_182283.1 | ProteinID:OAP10287.1 | UniProt:P49692 | PFAM:PF01248 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00881 | PRINTS:PR00882 | ScanProsite:PS01082 | PANTHER:PTHR23105 | PANTHER:PTHR23105:SF70 |
| InterPro:Ribosomal_L7A/L8 | InterPro:Ribosomal_L7A/L8_sf | InterPro:Ribosomal_L7Ae/L30e/S12e/Gad45 | InterPro:Ribosomal_L7Ae/L8/Nhp2 | InterPro:Ribosomal_L7Ae_CS | SUPFAM:SSF55315 |
| UniParc:UPI0000000B63 | EMBL:Z26806 | SEG:seg | : | : | : |
Description
RPL7AA60S ribosomal protein L7a-1 [Source:UniProtKB/Swiss-Prot;Acc:P49692]
Coordinates
chr2:+:19529743..19531677
Molecular Weight (calculated)
29131.2 Da
IEP (calculated)
10.849
GRAVY (calculated)
-0.564
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKKGVKVA AKKKTAEKVS NPLFERRPKQ FGIGGALPPK KDLSRYIKWP KSIRLQRQKR ILKQRLKVPP ALNQFTKTLD KNLATSLFKV LLKYRPEDKA
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN
101: AKKERLVKKA QAEAEGKPSE SKKPIVVKYG LNHVTYLIEQ NKAQLVVIAH DVDPIELVVW LPALCRKMEV PYCIVKGKSR LGAVVHQKTA SCLCLTTVKN
201: EDKLEFSKIL EAIKANFNDK YEEYRKKWGG GIMGSKSQAK TKAKERVIAK EAAQRMN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.