Factsheet for AT5G05760.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70131	Canola	cytosol	16.67	87.5
CDY14956	Canola	cytosol	25.6	77.48
Bra005866.1-P	Field mustard	cytosol, plastid	75.89	75.0
CDX80972	Canola	plastid	75.6	74.49
CDY11339	Canola	cytosol, plastid	75.3	74.41
KRH73168	Soybean	cytosol	63.39	63.58
KRH15025	Soybean	cytosol	61.01	61.56
KRH14969	Soybean	cytosol	42.56	59.09
PGSC0003DMT400047329	Potato	cytosol, plastid	55.95	56.12
Solyc07g054140.2.1	Tomato	cytosol, plastid	51.19	54.09
VIT_13s0067g00280.t01	Wine grape	plastid	62.8	53.42
AT3G24350.2	Thale cress	cytosol	45.83	42.66

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.1.3	EntrezGene:830461	ProteinID:AED90921.1	EMBL:AF051853	ArrayExpress:AT5G05760
EnsemblPlantsGene:AT5G05760	RefSeq:AT5G05760	TAIR:AT5G05760	RefSeq:AT5G05760-TAIR-G	EnsemblPlants:AT5G05760.1	TAIR:AT5G05760.1
EMBL:AY054184	EMBL:AY066041	Unigene:At.69918	ProteinID:BAB09670.1	GO:GO:0000139	GO:GO:0000149
GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886
GO:GO:0006888	GO:GO:0006906	GO:GO:0008150	GO:GO:0009504	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0031201	GO:GO:0043231
GO:GO:0048278	GO:GO:0061025	InterPro:IPR000727	RefSeq:NP_196195.1	PFAM:PF05739	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007095	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020100	PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00914
PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF117	UniProt:Q9FFK1	SMART:SM00397	InterPro:SNARE
SUPFAM:SSF47661	Symbol:SYP31	InterPro:Syntaxin/epimorphin_CS	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI00001362E4
SEG:seg	:	:	:	:	:

Description

SYP31Syntaxin-31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFK1]

Coordinates

chr5:-:1728893..1731090

Molecular Weight (calculated)

37313.7 Da

IEP (calculated)

9.026

GRAVY (calculated)

-0.399

Length

336 amino acids

Sequence
(BLAST)

001: MGSTFRDRTV ELHSLSQTLK KIGAIPSVHQ DEDDPASSKR SSPGSEFNKK ASRIGLGIKE TSQKITRLAK LAKQSTIFND RTVEIQELTV LIRNDITGLN
101: MALSDLQTLQ NMELADGNYS QDQVGHYTAV CDDLKTRLMG ATKQLQDVLT TRSENMKAHE NRKQLFSTKN AVDSPPQNNA KSVPEPPPWS SSSNPFGNLQ
201: QPLLPPLNTG APPGSQLRRR SAIENAPSQQ MEMSLLQQTV PKQENYSQSR AVALHSVESR ITELSGIFPQ LATMVTQQGE LAIRIDDNMD ESLVNVEGAR
301: SALLQHLTRI SSNRWLMMKI FAVIILFLIV FLFFVA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.