Factsheet for Solyc07g054140.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g010540.2.1
Solyc01g010580.2.1
Solyc01g020290.1.1
Solyc01g068530.2.1
Solyc01g081170.1.1
Solyc01g097760.2.1
Solyc01g097870.2.1
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc03g111230.2.1
Solyc03g115360.2.1
Solyc04g005680.2.1
Solyc04g008810.2.1
Solyc04g026100.1.1
Solyc04g063290.2.1
Solyc04g074300.2.1
Solyc04g081570.2.1
Solyc05g005690.1.1
Solyc05g007250.2.1
Solyc05g010750.2.1
Solyc05g010760.1.1
Solyc05g015640.2.1
Solyc06g007470.2.1
Solyc06g007520.2.1
Solyc06g050120.2.1
Solyc06g064460.2.1
Solyc06g064470.2.1
Solyc06g071870.2.1
Solyc06g071880.2.1
Solyc06g073790.2.1
Solyc06g073800.2.1
Solyc06g082650.2.1
Solyc06g082670.2.1
Solyc06g084230.2.1
Solyc07g032250.2.1
Solyc07g045210.1.1
Solyc07g063890.2.1
Solyc08g006030.2.1
Solyc08g074290.2.1
Solyc09g031760.1.1
Solyc09g065330.2.1
Solyc10g006580.2.1
Solyc10g018810.1.1
Solyc10g079000.1.1
Solyc11g042870.1.1
Solyc12g005330.1.1
Solyc12g006200.1.1
Solyc12g039120.1.1
Solyc12g042080.1.1
Solyc12g077580.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G05760.1	Solyc09g031760.1.1	AT1G02780.1	24556609
AT5G05760.1	Solyc06g007520.2.1	AT1G14320.1	24556609
AT5G05760.1	Solyc06g082650.2.1	AT1G14320.1	24556609
AT5G05760.1	Solyc06g082670.2.1	AT1G14320.1	24556609
AT5G05760.1	Solyc05g015640.2.1	AT1G27300.1	21798944
AT5G05760.1	Solyc03g111230.2.1	AT1G27400.1	24556609
AT5G05760.1	Solyc06g071870.2.1	AT1G27400.1	24556609
AT5G05760.1	Solyc06g071880.2.1	AT1G27400.1	24556609
AT5G05760.1	Solyc01g081170.1.1	AT1G66280.1	24556609
AT5G05760.1	Solyc07g045210.1.1	AT2G04280.1	24556609
AT5G05760.1	Solyc12g006200.1.1	AT2G04280.1	24556609
AT5G05760.1	Solyc07g063890.2.1	AT2G18020.1	24556609
AT5G05760.1	Solyc10g006580.2.1	AT2G18020.1	24556609
AT5G05760.1	Solyc12g005330.1.1	AT2G18020.1	24556609
AT5G05760.1	Solyc04g008810.2.1	AT2G40510.1	24556609
AT5G05760.1	Solyc06g007470.2.1	AT2G40510.1	24556609
AT5G05760.1	Solyc03g115360.2.1	AT3G02080.1	24556609
AT5G05760.1	Solyc12g039120.1.1	AT3G02080.1	24556609
AT5G05760.1	Solyc01g097870.2.1	AT3G04920.1	24556609
AT5G05760.1	Solyc06g084230.2.1	AT3G04920.1	24556609
AT5G05760.1	Solyc09g065330.2.1	AT3G04920.1	24556609
AT5G05760.1	Solyc10g079000.1.1	AT3G12030.1	24556609
AT5G05760.1	Solyc06g073790.2.1	AT3G48930.1	24556609
AT5G05760.1	Solyc06g073800.2.1	AT3G48930.1	24556609
AT5G05760.1	Solyc12g042080.1.1	AT3G48930.1	24556609
AT5G05760.1	Solyc04g063290.2.1	AT3G57490.1	24556609
AT5G05760.1	Solyc04g074300.2.1	AT3G57490.1	24556609
AT5G05760.1	Solyc12g077580.1.1	AT3G60770.1	24556609
AT5G05760.1	Solyc01g020290.1.1	AT3G62870.1	24556609
AT5G05760.1	Solyc01g097760.2.1	AT3G62870.1	24556609
AT5G05760.1	Solyc06g050120.2.1	AT3G62870.1	24556609
AT5G05760.1	Solyc06g064460.2.1	AT3G62870.1	24556609
AT5G05760.1	Solyc06g064470.2.1	AT3G62870.1	24556609
AT5G05760.1	Solyc10g018810.1.1	AT3G62870.1	24556609
AT5G05760.1	Solyc11g042870.1.1	AT3G62870.1	24556609
AT5G05760.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT5G05760.1	Solyc03g005980.2.1	AT4G19030.1	21798944
AT5G05760.1	Solyc04g081570.2.1	AT4G24190.1	24556609
AT5G05760.1	Solyc07g032250.2.1	AT4G29520.1	24556609
AT5G05760.1	Solyc05g010750.2.1	AT4G31340.1	24556609
AT5G05760.1	Solyc05g010760.1.1	AT4G31340.1	24556609
AT5G05760.1	Solyc08g006030.2.1	AT4G31340.1	24556609
AT5G05760.1	Solyc08g074290.2.1	AT4G31340.1	24556609
AT5G05760.1	Solyc01g010540.2.1	AT5G15200.1	24556609
AT5G05760.1	Solyc01g010580.2.1	AT5G15200.1	24556609
AT5G05760.1	Solyc04g005680.2.1	AT5G15200.1	24556609
AT5G05760.1	Solyc05g007250.2.1	AT5G15200.1	24556609
AT5G05760.1	Solyc01g068530.2.1	AT5G18380.1	24556609
AT5G05760.1	Solyc04g026100.1.1	AT5G18380.1	24556609
AT5G05760.1	Solyc05g005690.1.1	AT5G18380.1	24556609
AT5G05760.1	Solyc01g097870.2.1	AT5G28060.1	24556609
AT5G05760.1	Solyc06g084230.2.1	AT5G28060.1	24556609
AT5G05760.1	Solyc09g065330.2.1	AT5G28060.1	24556609

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047329	Potato	cytosol, plastid	91.51	86.87
KRH73168	Soybean	cytosol	59.43	56.42
KRH15025	Soybean	cytosol	57.86	55.26
Bra005866.1-P	Field mustard	cytosol, plastid	57.86	54.12
CDX80972	Canola	plastid	57.86	53.96
CDY11339	Canola	cytosol, plastid	57.55	53.82
AT5G05760.1	Thale cress	cytosol	54.09	51.19
KRH14969	Soybean	cytosol	38.68	50.83
VIT_13s0067g00280.t01	Wine grape	plastid	62.58	50.38
CDY14956	Canola	cytosol	16.67	47.75
Solyc08g067910.2.1	Tomato	plastid	49.06	45.75
CDX70131	Canola	cytosol	8.81	43.75

Protein Annotations

Gene3D:1.20.58.70	MapMan:22.7.1.3	GO:GO:0000139	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0006906	GO:GO:0008150
GO:GO:0009504	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192
GO:GO:0031201	GO:GO:0043231	GO:GO:0048278	InterPro:IPR000727	UniProt:K4CFV9	PFAM:PF05739
ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF117	SMART:SM00397	InterPro:SNARE
SUPFAM:SSF47661	EnsemblPlantsGene:Solyc07g054140.2	EnsemblPlants:Solyc07g054140.2.1	InterPro:Syntaxin/epimorphin_CS	InterPro:T_SNARE_dom	UniParc:UPI000276C3F5

Description

Syntaxin-31 [Source:Projected from Arabidopsis thaliana (AT5G05760) UniProtKB/Swiss-Prot;Acc:Q9FFK1]

Coordinates

chr7:+:62511512..62514961

Molecular Weight (calculated)

35153.2 Da

IEP (calculated)

7.116

GRAVY (calculated)

-0.626

Length

318 amino acids

Sequence
(BLAST)

001: MASSGAWTYR DRTSEFASLS KTLKKIAGTT GSDHEPQQNS ASSTTKVLQI PDRSEFNKKA SRIGLTIHQT FQKIDRLAKL AKRSSIFDDP SKEIQELTTS
101: IKNDITSLNV GVSDLQALQD MDVADGTHSK DTIVHCTAIC DDLKTRLMAA TKSFQEALTI RTKNMKAHED RKQIFSTNLS RENPLKQPTA EPPPWSTCQS
201: LTAIDAQGSN QLRRRLASDN PPSNELEMSM LQDQVPRQES YSQSRATALQ NVESTISELG GIFTHLATMV AQQGELAIRI DDNVDESLTN VEGAQGALLK
301: YLNRISSNSR KVSCTENY

Best Arabidopsis Sequence Match ( AT5G05760.1 )
(BLAST)

001: MGSTFRDRTV ELHSLSQTLK KIGAIPSVHQ DEDDPASSKR SSPGSEFNKK ASRIGLGIKE TSQKITRLAK LAKQSTIFND RTVEIQELTV LIRNDITGLN
101: MALSDLQTLQ NMELADGNYS QDQVGHYTAV CDDLKTRLMG ATKQLQDVLT TRSENMKAHE NRKQLFSTKN AVDSPPQNNA KSVPEPPPWS SSSNPFGNLQ
201: QPLLPPLNTG APPGSQLRRR SAIENAPSQQ MEMSLLQQTV PKQENYSQSR AVALHSVESR ITELSGIFPQ LATMVTQQGE LAIRIDDNMD ESLVNVEGAR
301: SALLQHLTRI SSNRWLMMKI FAVIILFLIV FLFFVA

Arabidopsis Description

SYP31Syntaxin-31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.