Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- golgi 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400044798 | Potato | golgi, mitochondrion | 98.63 | 98.63 |
| Solyc12g006200.1.1 | Tomato | golgi, mitochondrion, nucleus, plasma membrane | 82.65 | 83.36 |
| VIT_12s0057g01310.t01 | Wine grape | mitochondrion | 74.4 | 77.74 |
| KRH16980 | Soybean | mitochondrion | 74.74 | 76.45 |
| KRH72615 | Soybean | mitochondrion | 74.4 | 76.1 |
| CDY27873 | Canola | mitochondrion | 66.84 | 73.4 |
| Bra015145.1-P | Field mustard | mitochondrion | 69.93 | 72.55 |
| CDY00855 | Canola | mitochondrion | 69.42 | 71.5 |
| AT2G04280.1 | Thale cress | mitochondrion | 68.9 | 70.6 |
| AT4G12700.1 | Thale cress | mitochondrion | 68.04 | 70.59 |
| GSMUA_AchrUn_... | Banana | golgi, mitochondrion, plasma membrane | 61.34 | 66.85 |
| GSMUA_AchrUn_... | Banana | plastid | 61.0 | 60.37 |
| TraesCS1D01G141700.1 | Wheat | mitochondrion | 57.9 | 54.01 |
| EER94138 | Sorghum | mitochondrion | 58.76 | 53.69 |
| TraesCS1A01G142900.1 | Wheat | unclear | 57.56 | 53.69 |
| Os10t0456400-01 | Rice | golgi, mitochondrion | 58.93 | 53.68 |
| TraesCS1B01G158900.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 58.08 | 53.65 |
| Zm00001d032819_P001 | Maize | plasma membrane | 58.59 | 53.53 |
| Os01t0805100-01 | Rice | mitochondrion | 25.95 | 44.41 |
| TraesCS7A01G320300.1 | Wheat | golgi | 34.88 | 42.92 |
| TraesCS7B01G221300.2 | Wheat | golgi | 34.71 | 42.71 |
| TraesCS7D01G317200.1 | Wheat | golgi | 34.71 | 42.71 |
| Zm00001d019764_P001 | Maize | golgi, mitochondrion | 33.16 | 42.32 |
| HORVU7Hr1G076590.2 | Barley | endoplasmic reticulum, golgi | 35.05 | 41.21 |
| OQU89047 | Sorghum | endoplasmic reticulum, golgi, vacuole | 32.65 | 39.75 |
| Solyc01g005690.2.1 | Tomato | plastid | 28.01 | 36.79 |
| Solyc10g078400.1.1 | Tomato | golgi | 12.37 | 18.0 |
Protein Annotations
| EnsemblPlants:Solyc07g045210.1.1 | EnsemblPlantsGene:Solyc07g045210.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR31469 |
| PANTHER:PTHR31469:SF2 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000276CA08 | UniProt:K4CES8 | MapMan:35.2 |
Description
No Description!
Coordinates
chr7:-:58323905..58325653
Molecular Weight (calculated)
66173.6 Da
IEP (calculated)
5.236
GRAVY (calculated)
-0.483
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGRPSLLLS RSGSFRPENL GQNAMAMIGN LCFTIFVVGV LVFTIIAATY QPEDPLFHPS AKITNFLTSK SNATFRADDS VVRTGEDFLG VNQTAFTTFI
101: NLNDVDVPEN ADGGGVTENN LDCSGKIDDP VDCTDPDVFH LLMRAAIEKF KDIHFYRFGK PVRGSNDSSC HMAWRFRPKE GKTAAFYKDY RSFVVSRSEN
201: CTLDVVSIGD YHSGGNARKR KRKNRAGSDR TLGKLDEGFE KVTPKTEGEP IALPVVGEAV NDSLPVVESE SSFGNGKYLI YSGGGDRCKS MSHYLWSFMC
301: ALGEAQYLNR TLIMDLSICL SKIYTSSGVD EEGKDFRFYF DFEHLKDSAS VLDQIQFWSD WDQWHKKDRL SLHLVEDFRI TPMKLSGVQD TLIMRKFGSV
401: EPDNYWYRVC EGETESVVQR PWHLVWKSRR LMDIVSAISS RLNWDYDSVH VVRGEKARNR EMWPHLAEDT SPEALLSSLQ DKIDDGRNLY IATNEPDTSF
501: FDPLKDKYST HFLHEYMDLW DEKSEWYAET TKLNNGNPVE FDGYMRASVD TEVFFRGKKQ VETFNDLTRD CKDGINSCTS SS
101: NLNDVDVPEN ADGGGVTENN LDCSGKIDDP VDCTDPDVFH LLMRAAIEKF KDIHFYRFGK PVRGSNDSSC HMAWRFRPKE GKTAAFYKDY RSFVVSRSEN
201: CTLDVVSIGD YHSGGNARKR KRKNRAGSDR TLGKLDEGFE KVTPKTEGEP IALPVVGEAV NDSLPVVESE SSFGNGKYLI YSGGGDRCKS MSHYLWSFMC
301: ALGEAQYLNR TLIMDLSICL SKIYTSSGVD EEGKDFRFYF DFEHLKDSAS VLDQIQFWSD WDQWHKKDRL SLHLVEDFRI TPMKLSGVQD TLIMRKFGSV
401: EPDNYWYRVC EGETESVVQR PWHLVWKSRR LMDIVSAISS RLNWDYDSVH VVRGEKARNR EMWPHLAEDT SPEALLSSLQ DKIDDGRNLY IATNEPDTSF
501: FDPLKDKYST HFLHEYMDLW DEKSEWYAET TKLNNGNPVE FDGYMRASVD TEVFFRGKKQ VETFNDLTRD CKDGINSCTS SS
001: MFGRSAIRGG GFRAENLGQN ALTLIGNIGF SLFVFGVLIF TIIAATYEPE DPLFHPSDKI TTFLTSTSNA TLRSDDSVVK TGEDFMLANQ TAFAEFININ
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS
Arabidopsis Description
At2g04280 [Source:UniProtKB/TrEMBL;Acc:Q9SI07]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.