Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G320300.1 | Wheat | golgi | 97.89 | 97.89 |
| TraesCS7D01G317200.1 | Wheat | golgi | 97.25 | 97.25 |
| HORVU7Hr1G076590.2 | Barley | endoplasmic reticulum, golgi | 93.87 | 89.7 |
| Os01t0805100-01 | Rice | mitochondrion | 52.01 | 72.35 |
| Zm00001d019764_P001 | Maize | golgi, mitochondrion | 68.29 | 70.83 |
| OQU89047 | Sorghum | endoplasmic reticulum, golgi, vacuole | 68.71 | 67.99 |
| CDY27873 | Canola | mitochondrion | 41.23 | 36.79 |
| KRH16980 | Soybean | mitochondrion | 42.71 | 35.5 |
| Bra015145.1-P | Field mustard | mitochondrion | 42.07 | 35.47 |
| CDY00855 | Canola | mitochondrion | 42.28 | 35.4 |
| PGSC0003DMT400074186 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 42.92 | 35.24 |
| VIT_12s0057g01310.t01 | Wine grape | mitochondrion | 41.44 | 35.19 |
| KRH72615 | Soybean | mitochondrion | 42.28 | 35.15 |
| AT4G12700.1 | Thale cress | mitochondrion | 41.65 | 35.12 |
| Solyc12g006200.1.1 | Tomato | golgi, mitochondrion, nucleus, plasma membrane | 42.71 | 35.01 |
| AT2G04280.1 | Thale cress | mitochondrion | 41.86 | 34.86 |
| Solyc07g045210.1.1 | Tomato | golgi, mitochondrion | 42.71 | 34.71 |
| PGSC0003DMT400044798 | Potato | golgi, mitochondrion | 42.49 | 34.54 |
| TraesCS1B01G158900.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 41.86 | 31.43 |
| TraesCS2B01G179800.1 | Wheat | endoplasmic reticulum, plastid | 32.14 | 25.89 |
| TraesCS2B01G171800.1 | Wheat | mitochondrion | 13.11 | 15.82 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G221300.2 | EnsemblPlantsGene:TraesCS7B01G221300 | PANTHER:PTHR31469 | PANTHER:PTHR31469:SF7 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:413095410..413096831
Molecular Weight (calculated)
52645.9 Da
IEP (calculated)
7.444
GRAVY (calculated)
-0.280
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPSRPLLGR GAFLSSSAHA AAAIILIAFL LLTLLRLPLS PSISIYTPPP IASTPHHHLQ HQDHEDQEQE DASSCDLSSP LDCADPRLFH LMMRSAIDAF
101: PAVHFARFGR PVPGDPPSAS CDMAWRARTN SSASASPTAT TKDYRRFAIA RDPHTCAYSV TSIGNYHSGP NARKPRPGAS NATAAPPPPP LSRSQFAAAT
201: YLSYHGGGDR CKLMPHYMRS LLCALAEARY LNRTLVLDLS LCLAASYTAA GMPEEGKRLA FYFDIDHLRS SVVDIIEERQ FWEDWDRWGA QGQLGLRLIE
301: DTRVAPTKFS KAKDTLIVRK FGDVEPGNYW YHVCEGEAER VLPPPHHAIR LAPSLMSIVD DIISSMQQDF DSVHVGGSVG DLIERIGDGV DVGRQVYIAG
401: EGINTVSMEV LKAKYNNLRY LDEFQRLWRK ESKWFLEMKR LNGGVPVKFD GYMRELVDRE VFLKGKKKVE VLQ
101: PAVHFARFGR PVPGDPPSAS CDMAWRARTN SSASASPTAT TKDYRRFAIA RDPHTCAYSV TSIGNYHSGP NARKPRPGAS NATAAPPPPP LSRSQFAAAT
201: YLSYHGGGDR CKLMPHYMRS LLCALAEARY LNRTLVLDLS LCLAASYTAA GMPEEGKRLA FYFDIDHLRS SVVDIIEERQ FWEDWDRWGA QGQLGLRLIE
301: DTRVAPTKFS KAKDTLIVRK FGDVEPGNYW YHVCEGEAER VLPPPHHAIR LAPSLMSIVD DIISSMQQDF DSVHVGGSVG DLIERIGDGV DVGRQVYIAG
401: EGINTVSMEV LKAKYNNLRY LDEFQRLWRK ESKWFLEMKR LNGGVPVKFD GYMRELVDRE VFLKGKKKVE VLQ
001: MFGRSAIRGG GFRAENLGQN ALTLIGNIGF SLFVFGVLIF TIIAATYEPE DPLFHPSDKI TTFLTSTSNA TLRSDDSVVK TGEDFMLANQ TAFAEFININ
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS
Arabidopsis Description
At2g04280 [Source:UniProtKB/TrEMBL;Acc:Q9SI07]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.