CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27873	Canola	mitochondrion	90.44	96.42
AT2G04280.1	Thale cress	mitochondrion	87.79	87.32
KRH16980	Soybean	mitochondrion	75.4	74.87
VIT_12s0057g01310.t01	Wine grape	mitochondrion	73.27	74.33
KRH72615	Soybean	mitochondrion	74.51	73.99
PGSC0003DMT400074186	Potato	cytosol, golgi, mitochondrion, plasma membrane	70.97	69.62
Solyc07g045210.1.1	Tomato	golgi, mitochondrion	71.5	69.42
PGSC0003DMT400044798	Potato	golgi, mitochondrion	71.33	69.24
Solyc12g006200.1.1	Tomato	golgi, mitochondrion, nucleus, plasma membrane	70.62	69.15
GSMUA_AchrUn_...	Banana	golgi, mitochondrion, plasma membrane	59.47	62.92
GSMUA_AchrUn_...	Banana	plastid	60.71	58.33
TraesCS1D01G141700.1	Wheat	mitochondrion	58.41	52.88
TraesCS1A01G142900.1	Wheat	unclear	58.23	52.72
TraesCS1B01G158900.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	58.58	52.54
Zm00001d032819_P001	Maize	plasma membrane	58.41	51.81
EER94138	Sorghum	mitochondrion	58.05	51.49
Os10t0456400-01	Rice	golgi, mitochondrion	57.35	50.7
CDX90695	Canola	endoplasmic reticulum, golgi, plastid	44.78	45.92
CDY05025	Canola	endoplasmic reticulum, golgi, plastid	44.6	45.24
Os01t0805100-01	Rice	mitochondrion	26.02	43.24
Zm00001d019764_P001	Maize	golgi, mitochondrion	34.87	43.2
TraesCS7A01G320300.1	Wheat	golgi	35.4	42.28
TraesCS7B01G221300.2	Wheat	golgi	35.4	42.28
TraesCS7D01G317200.1	Wheat	golgi	35.22	42.07
OQU89047	Sorghum	endoplasmic reticulum, golgi, vacuole	34.34	40.59
HORVU7Hr1G076590.2	Barley	endoplasmic reticulum, golgi	35.04	40.0
CDY23872	Canola	endoplasmic reticulum, golgi, mitochondrion	13.98	19.8
CDY51258	Canola	endoplasmic reticulum, golgi, mitochondrion	13.98	19.6
CDX79955	Canola	endoplasmic reticulum, golgi, mitochondrion	13.81	19.5
CDX67655	Canola	endoplasmic reticulum, golgi, mitochondrion	13.81	19.35
CDY27198	Canola	endoplasmic reticulum, golgi, mitochondrion	13.63	18.97
CDY65073	Canola	endoplasmic reticulum, golgi	13.45	18.86

Protein Annotations

EnsemblPlants:CDY00855	EnsemblPlantsGene:GSBRNA2T00110798001	GO:A0A078EFJ1	PANTHER:PTHR31469	PANTHER:PTHR31469:SF2	ProteinID:CDY00855
ProteinID:CDY00855.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDE0BF	MapMan:35.2	:

Description

BnaCnng00550D

Coordinates

chrLK031922:-:676547..678244

Molecular Weight (calculated)

63886.0 Da

IEP (calculated)

5.332

GRAVY (calculated)

-0.451

Length

565 amino acids

Sequence
(BLAST)

001: MFGRSALHRA GGFRPENLGQ NALNLMGNIG FSLFVVGVLV FTIIAATYEP EDPLFHPSDK ITTFLTSTSN ATLRSDDSVV KTGEDFMAVN QTAFAAFINI
101: TDVEASANEE NAEGNQVDCD ASVPIDCKDS EVFHLMMKAT IERFKDIHFY KFGKPAVGEG ANSCDMAWRY RPKDGKSAAF YKDYRRFVIH KSDNCSLSVA
201: SIGDYHSGLN ARKRKRNQKA GFEKSDGKRD DFSLPLVGEA VNDSLPTVES DKAFKSGKYL VYVGGGDRCK TMNHFLWSFL CALGEAQYLN RTLVMDLTLC
301: LSSVYTSSGQ NEEGKDFRFY FDFEHLKEAA SVLDEAQFWA EWGKLHNKKT RLGLHLVEDF RVTPMKLADV KDTLIMRKFG SVEPDNYWYR VCEGDAESVV
401: KRPWHLLWKS RRLMEIVSAI ASRLNWDYDA VHIERGEKAR NTELWPNLDK DTSPSALLST LQDKVEEGRN LYIATNEAEL SFFNPLKDKY ATHFLDEYKD
501: LWDESSEWYS ETTKLNGGNP VEFDGYMRAS VDTEVFLRGK KQIETFNDLT NDCKDGVGTC NVAAT

Best Arabidopsis Sequence Match ( AT2G04280.1 )
(BLAST)

001: MFGRSAIRGG GFRAENLGQN ALTLIGNIGF SLFVFGVLIF TIIAATYEPE DPLFHPSDKI TTFLTSTSNA TLRSDDSVVK TGEDFMLANQ TAFAEFININ
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS

Arabidopsis Description

At2g04280 [Source:UniProtKB/TrEMBL;Acc:Q9SI07]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.