Factsheet for Zm00001d032819_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 5
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94138	Sorghum	mitochondrion	97.33	97.33
TraesCS1D01G141700.1	Wheat	mitochondrion	79.91	81.57
Os10t0456400-01	Rice	golgi, mitochondrion	81.63	81.38
TraesCS1A01G142900.1	Wheat	unclear	79.28	80.93
TraesCS1B01G158900.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	79.75	80.63
GSMUA_Achr5P13200_001	Banana	mitochondrion	52.9	63.95
CDY27873	Canola	mitochondrion	50.55	60.75
VIT_12s0057g01310.t01	Wine grape	mitochondrion	52.9	60.5
GSMUA_Achr1P03280_001	Banana	mitochondrion	38.93	59.05
Bra015145.1-P	Field mustard	mitochondrion	51.96	59.0
KRH72615	Soybean	mitochondrion	52.59	58.88
Solyc07g045210.1.1	Tomato	golgi, mitochondrion	53.53	58.59
KRH16980	Soybean	mitochondrion	52.28	58.52
PGSC0003DMT400044798	Potato	golgi, mitochondrion	53.38	58.42
CDY00855	Canola	mitochondrion	51.81	58.41
AT2G04280.1	Thale cress	mitochondrion	51.49	57.75
Solyc12g006200.1.1	Tomato	golgi, mitochondrion, nucleus, plasma membrane	52.28	57.71
PGSC0003DMT400074186	Potato	cytosol, golgi, mitochondrion, plasma membrane	51.96	57.47
AT4G12700.1	Thale cress	mitochondrion	49.92	56.68
Zm00001d022247_P001	Maize	plasma membrane	38.78	42.51
Zm00001d019764_P001	Maize	golgi, mitochondrion	29.98	41.89
Zm00001d010457_P001	Maize	cytosol	5.18	25.98
Zm00001d016377_P001	Maize	nucleus	5.18	22.92
Zm00001d004819_P001	Maize	mitochondrion	8.48	18.95
Zm00001d006931_P002	Maize	plasma membrane	11.46	18.34
Zm00001d006021_P001	Maize	cytosol	1.88	18.18
Zm00001d022294_P002	Maize	plastid	4.24	16.07
Zm00001d029266_P002	Maize	mitochondrion	11.3	15.22

Protein Annotations

EntrezGene:100191413	MapMan:35.2	UniProt:B4F8Q9	EMBL:BT033497	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	ProteinID:ONM06145.1	PFAM:PF10250
PANTHER:PTHR31469	PANTHER:PTHR31469:SF2	TMHMM:TMhelix	UniParc:UPI00017B6057	EnsemblPlantsGene:Zm00001d032819	EnsemblPlants:Zm00001d032819_P001
EnsemblPlants:Zm00001d032819_T001	SEG:seg	:	:	:	:

Description

calcium ion binding

Coordinates

chr1:-:239171155..239173068

Molecular Weight (calculated)

71230.7 Da

IEP (calculated)

5.209

GRAVY (calculated)

-0.395

Length

637 amino acids

Sequence
(BLAST)

001: MLGRAAALSA PRWRGGVPDL RAALRSGGNL LFALFVAAVL AFTLLAAFHS PDDPLLHPSS HQLTDFLTSA TSTSTFLTDD SVLRTGEDFN SSSTGAAGEV
101: AAGGVEVVAE AVPFIKLSEV GAEAEKTEPE TERAVTVDTD AATGEGAAVA EETAVAEAVS CDTEAPVDCT GDRELFNLLM RAAIERFPDL HFYRFGRPVA
201: VPGSPMECDL AWRFRPAADA IGTGRTTYYK DYRRFTLTRD VNTCSLVVDT VGEYHSGVGA KRNGRRKGKK GKKGKQDAPV TDFVPVKTQI RLDENTANNE
301: AAGAAAEPVF VVGEAVNDSL PVVASESDFS RGKYLIYIGG GERCKSMNHF IWGFLCALGE AQFLNRTLVM DLNVCLNARY TSSGKDEERD FRLYFDFEHL
401: KQSASVIDQS QFWQDWGQWH KKDRLKNFYT EDIRMTPMKL RDIKDTLIMR KFGNVEPDNY WSRVCEGETE GIIKRPWHFL WKSRRLMEIV SAIASRMNWD
501: FDSVHVVRGE KAQNTQLWPN LDRDTSPDSL LMALNDKVGA GRYLYIATNE PDKSFFNPLK EKYKTHFLDD FKYLWDENSE WFTETKELSN GQPVEFDGYM
601: RIAVDTEVFL RGKRHVETFN ELTRDCKDGV NTCSASS

Best Arabidopsis Sequence Match ( AT4G12700.1 )
(BLAST)

001: MSGRSAFSRT GGFRPENLGQ NAVSLIGSIG FSVLVIGVVV FTIIAATYEP EDPLFHPSDK ITTFLTSNSN ATLKSDDSIV KTGEDFMAAN QTAFGGFINI
101: ADVETSENDS DGNQLDCDTN IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY KDYRRFVIEK SGNCSVSVMG
201: IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS
301: VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW
401: NLLWKSKRLM EIVSAIASRL NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN PLKDKYKPHF LDEFKDLWDE
501: SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE TFNDLTNDCR DGIGTCNVAA S

Arabidopsis Description

At4g12700 [Source:UniProtKB/TrEMBL;Acc:Q9SU16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.