CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015145.1-P	Field mustard	mitochondrion	99.43	93.94
CDY00855	Canola	mitochondrion	96.42	90.44
AT2G04280.1	Thale cress	mitochondrion	87.36	81.51
KRH16980	Soybean	mitochondrion	76.6	71.35
VIT_12s0057g01310.t01	Wine grape	mitochondrion	74.91	71.27
KRH72615	Soybean	mitochondrion	75.47	70.3
Solyc12g006200.1.1	Tomato	golgi, mitochondrion, nucleus, plasma membrane	73.02	67.07
PGSC0003DMT400074186	Potato	cytosol, golgi, mitochondrion, plasma membrane	72.83	67.01
Solyc07g045210.1.1	Tomato	golgi, mitochondrion	73.4	66.84
PGSC0003DMT400044798	Potato	golgi, mitochondrion	73.21	66.67
GSMUA_AchrUn_...	Banana	golgi, mitochondrion, plasma membrane	61.32	60.86
GSMUA_AchrUn_...	Banana	plastid	61.13	55.1
TraesCS1D01G141700.1	Wheat	mitochondrion	59.81	50.8
EER94138	Sorghum	mitochondrion	60.94	50.71
TraesCS1A01G142900.1	Wheat	unclear	59.62	50.64
Zm00001d032819_P001	Maize	plasma membrane	60.75	50.55
TraesCS1B01G158900.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	60.0	50.48
Os10t0456400-01	Rice	golgi, mitochondrion	59.06	48.98
CDX90695	Canola	endoplasmic reticulum, golgi, plastid	46.98	45.19
CDY05025	Canola	endoplasmic reticulum, golgi, plastid	46.79	44.52
Zm00001d019764_P001	Maize	golgi, mitochondrion	36.98	42.98
Os01t0805100-01	Rice	mitochondrion	27.55	42.94
TraesCS7B01G221300.2	Wheat	golgi	36.79	41.23
TraesCS7A01G320300.1	Wheat	golgi	36.6	41.01
TraesCS7D01G317200.1	Wheat	golgi	36.42	40.8
OQU89047	Sorghum	endoplasmic reticulum, golgi, vacuole	36.23	40.17
HORVU7Hr1G076590.2	Barley	endoplasmic reticulum, golgi	36.42	38.99
CDY51258	Canola	endoplasmic reticulum, golgi, mitochondrion	14.72	19.35
CDY23872	Canola	endoplasmic reticulum, golgi, mitochondrion	14.53	19.3
CDX79955	Canola	endoplasmic reticulum, golgi, mitochondrion	14.53	19.25
CDX67655	Canola	endoplasmic reticulum, golgi, mitochondrion	14.53	19.11
CDY27198	Canola	endoplasmic reticulum, golgi, mitochondrion	14.34	18.72
CDY65073	Canola	endoplasmic reticulum, golgi	14.15	18.61

Protein Annotations

EnsemblPlants:CDY27873	EnsemblPlantsGene:GSBRNA2T00038720001	GO:A0A078GTB8	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR31469	PANTHER:PTHR31469:SF2	ProteinID:CDY27873	ProteinID:CDY27873.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EE754D	UniProt:A0A078GTB8	MapMan:35.2	:	:	:

Description

BnaA07g04630DBnaA07g04630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTB8]

Coordinates

chrLK032211:+:137618..139303

Molecular Weight (calculated)

60163.8 Da

IEP (calculated)

5.808

GRAVY (calculated)

-0.432

Length

530 amino acids

Sequence
(BLAST)

001: MFGRSALHRA GGFRPENLGQ NALNLIGNIG FSLFVVGVLV FTIIAATYEP EDPLFHPSDK ITTFLTSTSN ATLRSDESVV KTGEDFMPVN QTAFAAFINI
101: TDVEATASEE NELDCDASVP VDCKDSDVFH LMMKATIERF KDIHFYKFGK PAVGEGANSC DMAWRYRPKD GKSAAFYKDY RRFVIHKSDN CTLSVATIGE
201: YHSGLNARKR KRNQKAAVND SLPTVESDKA FTSGKYLVYV GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS VYTSSGQSEE GKDFRFYFDF
301: EHLKEAASVL DEAQFWAEWG KLHNKKTRLG LHLVEDFRVT PMKLSDVKDT LIMRKFGSVE PDNYWYRVCE GDAESVVKRP WHLLWKSRRL MEIVSAIASR
401: LNWDYDAVHI ERGEKARNTE LWPNLEKDTS PKGRNLYIAT NEAELSFFNP LKDKYATHFL DEYKDLWDES SEWYSETTKL NGGNPVEFDG YMRASVDTEV
501: FLRGKKQIET FNELTNDCKD GVGTCNVAAT

Best Arabidopsis Sequence Match ( AT2G04280.1 )
(BLAST)

001: MFGRSAIRGG GFRAENLGQN ALTLIGNIGF SLFVFGVLIF TIIAATYEPE DPLFHPSDKI TTFLTSTSNA TLRSDDSVVK TGEDFMLANQ TAFAEFININ
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS

Arabidopsis Description

At2g04280 [Source:UniProtKB/TrEMBL;Acc:Q9SI07]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.