CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 3
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019764_P001	Maize	golgi, mitochondrion	84.1	88.16
Os01t0805100-01	Rice	mitochondrion	49.37	69.41
TraesCS7B01G221300.2	Wheat	golgi	67.99	68.71
TraesCS7A01G320300.1	Wheat	golgi	67.99	68.71
TraesCS7D01G317200.1	Wheat	golgi	67.78	68.5
HORVU7Hr1G076590.2	Barley	endoplasmic reticulum, golgi	66.95	64.65
CDY27873	Canola	mitochondrion	40.17	36.23
Bra015145.1-P	Field mustard	mitochondrion	40.59	34.58
CDY00855	Canola	mitochondrion	40.59	34.34
VIT_12s0057g01310.t01	Wine grape	mitochondrion	39.54	33.93
AT4G12700.1	Thale cress	mitochondrion	39.75	33.87
AT2G04280.1	Thale cress	mitochondrion	39.75	33.45
Solyc07g045210.1.1	Tomato	golgi, mitochondrion	39.75	32.65
PGSC0003DMT400044798	Potato	golgi, mitochondrion	39.54	32.47
PGSC0003DMT400074186	Potato	cytosol, golgi, mitochondrion, plasma membrane	39.12	32.47
KRH72615	Soybean	mitochondrion	38.49	32.34
KRH16980	Soybean	mitochondrion	38.49	32.34
Solyc12g006200.1.1	Tomato	golgi, mitochondrion, nucleus, plasma membrane	38.91	32.24
EER94138	Sorghum	mitochondrion	38.7	29.04
EER99762	Sorghum	cytosol, endoplasmic reticulum, nucleus, plastid	31.59	25.81
EER94809	Sorghum	mitochondrion	13.18	16.07
EER97624	Sorghum	mitochondrion	11.72	14.07

Protein Annotations

EnsemblPlants:OQU89047	EnsemblPlantsGene:SORBI_3002G138300	PANTHER:PTHR31469	PANTHER:PTHR31469:SF7	ProteinID:OQU89047	ProteinID:OQU89047.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0009DC8BC4	UniProt:A0A1W0W3T7	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr2:-:21432321..21435715

Molecular Weight (calculated)

53260.2 Da

IEP (calculated)

8.103

GRAVY (calculated)

-0.181

Length

478 amino acids

Sequence
(BLAST)

001: MDPSRPLLRR GAILSSSVQA ATALLLVIVL LVTLLRLPLS ASPHAAATAT ITDQHQEQTC DPTSPLDCAD PRLFHLMMRS AIEAFPAVHF ARFGRPVPGD
101: PPSSSCDMAW RARSDSDSPS KATTKDYRRF AIARDPHTCA YSVLSIGDYH SGPNARKPRR GATNATIATP PPPALSRSQF VQGAYLAYLG GGDRCKPMPH
201: YLRSLLCALA EARYLNRTLV LDLTLCLAAS YAAPGTGGMP EEGKRLAFYI DVEHLQSQVP IIEERQFWAD WDSWGVQGQL RARLIEDTKL VPIKFSKVRD
301: TLIVRKFGDV EPGNYWYNVC EGEAKDLLRP LHSVMRWAPS LMHIVDDIIS RMQPAFDSVH MNAKGVDLGQ RVQEVLGGGR QVYIAGEGVN SALLESFKAE
401: CKCIVHYLDE FEDLWGTDTK WFLEMKRLNG GVPVEFDGYM REVVDREVFL KGKKKVEVLR NGFLWTLPRY ASKSLVID

Best Arabidopsis Sequence Match ( AT4G12700.1 )
(BLAST)

001: MSGRSAFSRT GGFRPENLGQ NAVSLIGSIG FSVLVIGVVV FTIIAATYEP EDPLFHPSDK ITTFLTSNSN ATLKSDDSIV KTGEDFMAAN QTAFGGFINI
101: ADVETSENDS DGNQLDCDTN IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY KDYRRFVIEK SGNCSVSVMG
201: IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS
301: VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW
401: NLLWKSKRLM EIVSAIASRL NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN PLKDKYKPHF LDEFKDLWDE
501: SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE TFNDLTNDCR DGIGTCNVAA S

Arabidopsis Description

At4g12700 [Source:UniProtKB/TrEMBL;Acc:Q9SU16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.