Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G320300.1 | Wheat | golgi | 90.1 | 94.29 |
| TraesCS7D01G317200.1 | Wheat | golgi | 89.7 | 93.87 |
| TraesCS7B01G221300.2 | Wheat | golgi | 89.7 | 93.87 |
| Os01t0805100-01 | Rice | mitochondrion | 48.48 | 70.59 |
| Zm00001d019764_P001 | Maize | golgi, mitochondrion | 64.24 | 69.74 |
| OQU89047 | Sorghum | endoplasmic reticulum, golgi, vacuole | 64.65 | 66.95 |
| CDY27873 | Canola | mitochondrion | 38.99 | 36.42 |
| KRH16980 | Soybean | mitochondrion | 40.61 | 35.33 |
| VIT_12s0057g01310.t01 | Wine grape | mitochondrion | 39.6 | 35.19 |
| Bra015145.1-P | Field mustard | mitochondrion | 39.8 | 35.12 |
| Solyc07g045210.1.1 | Tomato | golgi, mitochondrion | 41.21 | 35.05 |
| CDY00855 | Canola | mitochondrion | 40.0 | 35.04 |
| KRH72615 | Soybean | mitochondrion | 40.2 | 34.97 |
| PGSC0003DMT400044798 | Potato | golgi, mitochondrion | 41.01 | 34.88 |
| PGSC0003DMT400074186 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 40.4 | 34.72 |
| AT4G12700.1 | Thale cress | mitochondrion | 39.19 | 34.58 |
| Solyc12g006200.1.1 | Tomato | golgi, mitochondrion, nucleus, plasma membrane | 40.2 | 34.49 |
| AT2G04280.1 | Thale cress | mitochondrion | 39.39 | 34.33 |
| HORVU2Hr1G028070.1 | Barley | endoplasmic reticulum, plastid | 22.22 | 28.42 |
| HORVU2Hr1G026040.3 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 12.32 | 15.17 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G076590.2 | EnsemblPlantsGene:HORVU7Hr1G076590 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR31469 |
| PANTHER:PTHR31469:SF7 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B479CF4 | UniProt:A0A287WYP2 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr7H:+:448207206..448210106
Molecular Weight (calculated)
55107.5 Da
IEP (calculated)
6.922
GRAVY (calculated)
-0.308
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: ERPQRHARWS ELGTDPNLAA VTMDPSRPLL GRGAFLSSSA HVAAAIILIA FLILTLLRLP LAPSISIYTP PPLASTPHHH LQHQDHEDQE QEDASSCDLS
101: SPLDCADPRL FHLMMRSAID AFPAVHFARF GRPVPGDPPS ASCDMAWRAR TNSSASASPT ATTKDYRRFA ITRDPHTCAY SVTSIGDYHS GPNARKPRPG
201: ASNATAAPPP PPLSRSQFTA ATYLSYHGGG DRCKPMPHYT RSLLCALAEA RYLNRTLVLD LTLCLAASYT AAGMPEEGKR LAFYFDVDHL RSSVVDIIEE
301: RQFWEDWDRW GAQGQLGLRL IEDTRVGPTK FSKATDSLIV RKFGDVEPGN YWYHVCEDEA ERVLSLPHHA ICLAPSLMSI VNDIISSMQQ DFDSVHVGGS
401: VEDLIRGIED GVDVGRQVYI AGEGINTVSM EALKAKHNNL CYLDEFQRLW RKDSKWFLEM KRLNAGVPVK FDGYMRELVD REVFLKGKKK VEVLR
101: SPLDCADPRL FHLMMRSAID AFPAVHFARF GRPVPGDPPS ASCDMAWRAR TNSSASASPT ATTKDYRRFA ITRDPHTCAY SVTSIGDYHS GPNARKPRPG
201: ASNATAAPPP PPLSRSQFTA ATYLSYHGGG DRCKPMPHYT RSLLCALAEA RYLNRTLVLD LTLCLAASYT AAGMPEEGKR LAFYFDVDHL RSSVVDIIEE
301: RQFWEDWDRW GAQGQLGLRL IEDTRVGPTK FSKATDSLIV RKFGDVEPGN YWYHVCEDEA ERVLSLPHHA ICLAPSLMSI VNDIISSMQQ DFDSVHVGGS
401: VEDLIRGIED GVDVGRQVYI AGEGINTVSM EALKAKHNNL CYLDEFQRLW RKDSKWFLEM KRLNAGVPVK FDGYMRELVD REVFLKGKKK VEVLR
001: MSGRSAFSRT GGFRPENLGQ NAVSLIGSIG FSVLVIGVVV FTIIAATYEP EDPLFHPSDK ITTFLTSNSN ATLKSDDSIV KTGEDFMAAN QTAFGGFINI
101: ADVETSENDS DGNQLDCDTN IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY KDYRRFVIEK SGNCSVSVMG
201: IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS
301: VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW
401: NLLWKSKRLM EIVSAIASRL NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN PLKDKYKPHF LDEFKDLWDE
501: SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE TFNDLTNDCR DGIGTCNVAA S
101: ADVETSENDS DGNQLDCDTN IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY KDYRRFVIEK SGNCSVSVMG
201: IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS
301: VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW
401: NLLWKSKRLM EIVSAIASRL NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN PLKDKYKPHF LDEFKDLWDE
501: SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE TFNDLTNDCR DGIGTCNVAA S
Arabidopsis Description
At4g12700 [Source:UniProtKB/TrEMBL;Acc:Q9SU16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.