Factsheet for HORVU2Hr1G028070.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

plastid 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	endoplasmic reticulum, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G179800.1	Wheat	endoplasmic reticulum, plastid	91.99	60.65
TraesCS2A01G154600.1	Wheat	unclear	90.18	59.97
Zm00001d022247_P001	Maize	plasma membrane	85.27	56.8
Os07t0633600-01	Rice	golgi	85.27	56.41
EER99762	Sorghum	cytosol, endoplasmic reticulum, nucleus, plastid	83.46	55.21
GSMUA_Achr4P00760_001	Banana	golgi, plasma membrane	69.77	47.96
GSMUA_Achr6P01490_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	70.28	46.5
VIT_06s0004g00600.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	65.37	45.34
AT4G08810.1	Thale cress	endoplasmic reticulum, golgi, plastid	64.34	45.11
PGSC0003DMT400082037	Potato	endoplasmic reticulum, plasma membrane	64.08	44.85
CDY05025	Canola	endoplasmic reticulum, golgi, plastid	64.34	44.7
CDX90695	Canola	endoplasmic reticulum, golgi, plastid	63.57	44.65
Bra000656.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	63.82	44.42
KRH58921	Soybean	endoplasmic reticulum	65.37	44.15
KRH42826	Soybean	nucleus	65.12	43.83
Solyc01g005690.2.1	Tomato	plastid	33.07	28.89
HORVU7Hr1G076590.2	Barley	endoplasmic reticulum, golgi	28.42	22.22
HORVU2Hr1G026040.3	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	18.35	17.66

Protein Annotations

EnsemblPlants:HORVU2Hr1G028070.1	EnsemblPlantsGene:HORVU2Hr1G028070	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0016020	GO:GO:0042175
InterPro:GDP-Fuc_O-FucTrfase	PANTHER:PTHR31469	PANTHER:PTHR31469:SF2	PFAM:PF10250	SEG:seg	MapMan:35.2

Description

No Description!

Coordinates

chrchr2H:+:93963309..94043033

Molecular Weight (calculated)

44759.5 Da

IEP (calculated)

9.337

GRAVY (calculated)

-0.482

Length

387 amino acids

Sequence
(BLAST)

001: PPPPPPSRPS AVGEVPVSQS LIKAASNVCF SFFVLAVLAV TVVAVTYQPP DPWLQSSAAI TTSLARVLPN SXSEAEFRRG KYLYYMRGGD HCKSMNQFIW
101: SFLCGLGEAK FLNRTFVMDL NMCLSGAHTA DGKDVDGKDF RYYFDFEHLK ESVSLVEKGD FLKDWRRWDK KKGPGRISVR KVPTYKVTPM QLKKDKSNII
201: WRQFDGHEPE NYWYRVCEGR AAKVIQRPWY AIWKSKRLMN IVTEIAGRMD WDYDGLHVVR GWKAMNKKMY PNLDADTSPD AIVDKVTKLI KPWRNLYIAT
301: NEPFYNYFDK LRSHYHVHLL DDYKELWSNT SEWHNETTAI NNGKYVPFDA YMKVIVDTEV FYRSKAKVET FNNLTRDCKD GINTCNL

Best Arabidopsis Sequence Match ( AT4G08810.1 )
(BLAST)

001: MKESDLTTEP IAQNLIKLIS NVCFSVFVFT VLIFTVIAVT YQPPDPWLES APALTKLLTE TENATFKIDG SILKTGEDLA SSPSSSPPSN STEQVTEATI
101: EKSEAKIGNM TVKNSIDCDE DLKIVNCSDP RVLVAVERFN LKVFKSIVFL EYETPVNGSK LDECDVSWRF RNKKEKSWRR YRDFRRFRFG FGENCTYKVF
201: HTSGWHSGVN ARRPRISRPS SSRGARGGDS EINDTIPTLG SQTSFRRGKY LYYSRGGDYC KGMNQYMWSF LCGLGEAMYL NRTFVMDLSL CLSSSYSSKG
301: KDEEGKDFRY YFDFEHLKET ASIVEEGEFL RDWKKWNRLH KRKVPVRKVK THRVSPLQLS KDKSTIIWRQ FDTPEPENYW YRVCEGQASK YVERPWHALW
401: KSKRLMNIVS EISGKMDWDF DAVHVVRGEK AKNKKLWPHL DADTWPDAIL TKLKGLVQVW RNLYVATNEP FYNYFDKLRS QYKVHLLDDY SYLWGNKSEW
501: YNETSLLNNG KPVEFDGYMR VAVDTEVFYR GKTRVETFYN LTTDCKDGIN TC

Arabidopsis Description

SUB1SUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWI5]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.