Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 3
- plastid 1
- extracellular 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g005690.2.1 | Tomato | plastid | 68.72 | 85.78 |
| AT4G08810.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 71.97 | 72.1 |
| Bra000656.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 70.89 | 70.5 |
| VIT_06s0004g00600.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 71.07 | 70.43 |
| CDX90695 | Canola | endoplasmic reticulum, golgi, plastid | 69.98 | 70.24 |
| CDY05025 | Canola | endoplasmic reticulum, golgi, plastid | 70.34 | 69.84 |
| KRH58921 | Soybean | endoplasmic reticulum | 70.52 | 68.06 |
| KRH42826 | Soybean | nucleus | 70.16 | 67.48 |
| HORVU2Hr1G028070.1 | Barley | endoplasmic reticulum, plastid | 44.85 | 64.08 |
| GSMUA_Achr4P00760_001 | Banana | golgi, plasma membrane | 61.12 | 60.04 |
| GSMUA_Achr6P01490_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 61.3 | 57.95 |
| Os07t0633600-01 | Rice | golgi | 59.86 | 56.58 |
| EER99762 | Sorghum | cytosol, endoplasmic reticulum, nucleus, plastid | 59.86 | 56.58 |
| Zm00001d022247_P001 | Maize | plasma membrane | 59.13 | 56.28 |
| TraesCS2B01G179800.1 | Wheat | endoplasmic reticulum, plastid | 58.77 | 55.37 |
| TraesCS2A01G154600.1 | Wheat | unclear | 58.23 | 55.33 |
| PGSC0003DMT400074186 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 47.2 | 45.31 |
| PGSC0003DMT400044798 | Potato | golgi, mitochondrion | 47.56 | 45.19 |
| PGSC0003DMT400003520 | Potato | mitochondrion | 6.69 | 22.56 |
| PGSC0003DMT400021597 | Potato | golgi | 12.3 | 16.87 |
| PGSC0003DMT400048710 | Potato | extracellular | 5.24 | 16.57 |
Protein Annotations
| EntrezGene:102596121 | MapMan:35.2 | InterPro:GDP-Fuc_O-FucTrfase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0005975 | GO:GO:0006004 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016757 | GO:GO:0042175 | UniProt:M1D5I3 | PFAM:PF10250 | EnsemblPlantsGene:PGSC0003DMG400032216 |
| PGSC:PGSC0003DMG400032216 | EnsemblPlants:PGSC0003DMT400082037 | PANTHER:PTHR31469 | PANTHER:PTHR31469:SF2 | TMHMM:TMhelix | UniParc:UPI000295164B |
| RefSeq:XP_006354133.1 | SEG:seg | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400032216]
Coordinates
chr1:-:1313906..1316275
Molecular Weight (calculated)
64265.8 Da
IEP (calculated)
8.038
GRAVY (calculated)
-0.575
Length
553 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDSTTDPIG QNLIKVISNV CFSVFVFSVL IITVIAITYQ PPDPWESSRA LTRVFTQIEN ATFKVDNSVL KTGEDVASSP IEAPAGVFTL VPITEAIIEK
101: SEENLSNETL KSGCEDVNVV NCSDPRVLFT IERFNLKTFK SIAFLDYRTP VNGSKPNECD VAWRFRNKKE RSWRKYRDFR RFKIGFTDDC SYKVVHAGRW
201: HSGGNARRPR IRVNSTRTST RAKIAPPVID EEINDTIPIM GSDSDFKNGR YLYYSRGGDY CKGMNQYMWS FLCALGEAQY LNRTFVMDLS ICLASSHTSS
301: HKDEEGKDFR FYFDFEHLKE TAYIVEEGDF HKDWRKWNKA HKKKISVRKV KDYKVSPDQL LKDKSTIIWR QFDAPEPENY WYRVCEGPSA KYIQRPWHAV
401: WKSKRLMNIV TEISGSMDWD FDAVHVVRGE KAQNKALWPH LDADTSPDSL VTKLQGIITP WRNLYVATNE PYYNYFDKLR SHYKVHLLDD YNYLWSNTSE
501: WYNETTQLNG GSPVEFDGYM RVEVDTEVLY RAKSRVETFY NLTKDCKDGI NTC
101: SEENLSNETL KSGCEDVNVV NCSDPRVLFT IERFNLKTFK SIAFLDYRTP VNGSKPNECD VAWRFRNKKE RSWRKYRDFR RFKIGFTDDC SYKVVHAGRW
201: HSGGNARRPR IRVNSTRTST RAKIAPPVID EEINDTIPIM GSDSDFKNGR YLYYSRGGDY CKGMNQYMWS FLCALGEAQY LNRTFVMDLS ICLASSHTSS
301: HKDEEGKDFR FYFDFEHLKE TAYIVEEGDF HKDWRKWNKA HKKKISVRKV KDYKVSPDQL LKDKSTIIWR QFDAPEPENY WYRVCEGPSA KYIQRPWHAV
401: WKSKRLMNIV TEISGSMDWD FDAVHVVRGE KAQNKALWPH LDADTSPDSL VTKLQGIITP WRNLYVATNE PYYNYFDKLR SHYKVHLLDD YNYLWSNTSE
501: WYNETTQLNG GSPVEFDGYM RVEVDTEVLY RAKSRVETFY NLTKDCKDGI NTC
001: MKESDLTTEP IAQNLIKLIS NVCFSVFVFT VLIFTVIAVT YQPPDPWLES APALTKLLTE TENATFKIDG SILKTGEDLA SSPSSSPPSN STEQVTEATI
101: EKSEAKIGNM TVKNSIDCDE DLKIVNCSDP RVLVAVERFN LKVFKSIVFL EYETPVNGSK LDECDVSWRF RNKKEKSWRR YRDFRRFRFG FGENCTYKVF
201: HTSGWHSGVN ARRPRISRPS SSRGARGGDS EINDTIPTLG SQTSFRRGKY LYYSRGGDYC KGMNQYMWSF LCGLGEAMYL NRTFVMDLSL CLSSSYSSKG
301: KDEEGKDFRY YFDFEHLKET ASIVEEGEFL RDWKKWNRLH KRKVPVRKVK THRVSPLQLS KDKSTIIWRQ FDTPEPENYW YRVCEGQASK YVERPWHALW
401: KSKRLMNIVS EISGKMDWDF DAVHVVRGEK AKNKKLWPHL DADTWPDAIL TKLKGLVQVW RNLYVATNEP FYNYFDKLRS QYKVHLLDDY SYLWGNKSEW
501: YNETSLLNNG KPVEFDGYMR VAVDTEVFYR GKTRVETFYN LTTDCKDGIN TC
101: EKSEAKIGNM TVKNSIDCDE DLKIVNCSDP RVLVAVERFN LKVFKSIVFL EYETPVNGSK LDECDVSWRF RNKKEKSWRR YRDFRRFRFG FGENCTYKVF
201: HTSGWHSGVN ARRPRISRPS SSRGARGGDS EINDTIPTLG SQTSFRRGKY LYYSRGGDYC KGMNQYMWSF LCGLGEAMYL NRTFVMDLSL CLSSSYSSKG
301: KDEEGKDFRY YFDFEHLKET ASIVEEGEFL RDWKKWNRLH KRKVPVRKVK THRVSPLQLS KDKSTIIWRQ FDTPEPENYW YRVCEGQASK YVERPWHALW
401: KSKRLMNIVS EISGKMDWDF DAVHVVRGEK AKNKKLWPHL DADTWPDAIL TKLKGLVQVW RNLYVATNEP FYNYFDKLRS QYKVHLLDDY SYLWGNKSEW
501: YNETSLLNNG KPVEFDGYMR VAVDTEVFYR GKTRVETFYN LTTDCKDGIN TC
Arabidopsis Description
SUB1SUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWI5]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.