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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • golgi 4
  • nucleus 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:golgi, nucleus, plastid
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g078400.1.1 Tomato golgi 82.38 83.0
Zm00001d010457_P001 Maize cytosol 23.08 73.23
GSMUA_Achr5P27540_001 Banana cytosol 51.36 71.38
KRH36835 Soybean endoplasmic reticulum 67.74 70.91
KRH71696 Soybean golgi 67.99 70.26
VIT_08s0040g01260.t01 Wine grape golgi 65.76 66.58
TraesCS2A01G146500.1 Wheat endoplasmic reticulum 48.39 64.78
Bra007268.1-P Field mustard golgi 62.28 62.28
AT3G56750.1 Thale cress endoplasmic reticulum, golgi, plastid 61.79 61.79
CDY65073 Canola endoplasmic reticulum, golgi 61.79 61.79
CDY51258 Canola endoplasmic reticulum, golgi, mitochondrion 61.54 61.54
CDY27198 Canola endoplasmic reticulum, golgi, mitochondrion 61.79 61.33
CDX67655 Canola endoplasmic reticulum, golgi, mitochondrion 61.29 61.29
CDX79955 Canola endoplasmic reticulum, golgi, mitochondrion 60.55 61.0
AT2G41150.2 Thale cress endoplasmic reticulum, golgi 61.04 60.89
Bra004601.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion 59.55 60.76
CDY23872 Canola endoplasmic reticulum, golgi, mitochondrion 59.31 59.9
EER94809 Sorghum mitochondrion 57.32 58.93
TraesCS2B01G171800.1 Wheat mitochondrion 57.07 58.67
TraesCS2D01G151100.1 Wheat mitochondrion 56.82 58.42
Os03t0366700-01 Rice plastid 56.33 57.47
EER97624 Sorghum mitochondrion 56.58 57.29
HORVU2Hr1G026040.3 Barley endoplasmic reticulum, golgi, mitochondrion, plastid 56.82 56.97
Zm00001d006931_P002 Maize plasma membrane 55.83 56.53
Zm00001d029266_P002 Maize mitochondrion 57.32 48.84
Bra003250.1-P Field mustard golgi 48.14 46.52
Zm00001d004819_P001 Maize mitochondrion 31.51 44.56
Zm00001d022294_P002 Maize plastid 18.11 43.45
GSMUA_Achr3P09270_001 Banana plasma membrane 60.3 36.99
Zm00001d016377_P001 Maize nucleus 12.66 35.42
PGSC0003DMT400074186 Potato cytosol, golgi, mitochondrion, plasma membrane 19.6 13.72
PGSC0003DMT400044798 Potato golgi, mitochondrion 19.11 13.23
PGSC0003DMT400082037 Potato endoplasmic reticulum, plasma membrane 16.87 12.3
PGSC0003DMT400048710 Potato extracellular 4.22 9.71
PGSC0003DMT400003520 Potato mitochondrion 3.47 8.54
Protein Annotations
EnsemblPlants:PGSC0003DMT400021597EnsemblPlantsGene:PGSC0003DMG400008376EntrezGene:102590827Gene3D:3.40.50.11350GO:GO:0005575GO:GO:0016020
GO:GO:0016021PANTHER:PTHR31469PANTHER:PTHR31469:SF8PGSC:PGSC0003DMG400008376RefSeq:XP_006362271.1SEG:seg
TMHMM:TMhelixUniParc:UPI000295B84BUniProt:M1AFE0MapMan:35.2::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400008376]
Coordinates
chr10:-:59252943..59258098
Molecular Weight (calculated)
45707.9 Da
IEP (calculated)
9.137
GRAVY (calculated)
-0.406
Length
403 amino acids
Sequence
(BLAST)
001: MAIQKTHKGK TKPRSPTLIL TVSIVAITLL YIASTLFSPN GFSFSTSITS KNSVFSKNRR QHNGPHKYIY WGNRIDCPGK HCDTCAGLGH QESSLRCALE
101: EAMFLQRTFV MPARMCINPI HNKRGILHGS GNSISEETEE RWSDSSCAMD SLYDLDLISD TVPVILDNSE MWHHVLATSM KLGSRGVAHV EGVSKTDLKE
201: KSSYSNILLI NRTASPLSWF AECKDRKNHS SILLPFSFLP SMAAEKLRYA AEEIKKLLGD YDAMHVRRGD VLKTRKDRFG VERSKHPHLD RDTHAEFILC
301: RIAKWVPPGR TLFIASNERT PGYFSPLAVR YKLAYSSNYS SILDPLIENN YELFMVERLI LMGAKTFIKT MKEDDNDLSL SDDSKKNTKK WEIPVYSRDG
401: EKC
Best Arabidopsis Sequence Match ( AT2G41150.2 )
(BLAST)
001: MATMSKPHKL KATPGSQRLV LLCIVAVAFL LLFTSVISTG GLALPYRTTL IGYFVRSTRN KTQHSLSDKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSRMCIN PIHNKKGILN RSNNETREES WEVSSCAMES LYDIDLISEK IPVILDDSET WHIMLSTSMK LKERGSAHVY GANRHELNDS
201: SDFTNLLLIN RTASPLAWFV ECKDRGNRSD VMLPYSFLQT MAASRLRDAA EKIKAKLGDY DAIHVRRGDK LKTRKDRFRV ERSQFPHLDR DTRPEFIIGR
301: IQKQIPPGRT LFIGSNERTP DFFSPLAIRY KVAYSSNFSE ILDPIIENNY QLFMVERLIM MGAKTFFKTF REYETDLTLT DDPKKNKNWE IPVYTMDEGK
401: EAAS
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hit /.../7 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). [Source:TAIR;Acc:AT2G41150]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.