Factsheet for TraesCS2B01G171800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G151100.1	Wheat	mitochondrion	98.47	98.47
TraesCS2A01G146500.1	Wheat	endoplasmic reticulum	73.72	96.01
HORVU2Hr1G026040.3	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	89.8	87.56
EER97624	Sorghum	mitochondrion	78.83	77.64
Zm00001d006931_P002	Maize	plasma membrane	77.81	76.63
GSMUA_Achr5P27540_001	Banana	cytosol	49.49	66.9
KRH36835	Soybean	endoplasmic reticulum	61.22	62.34
KRH71696	Soybean	golgi	61.73	62.05
Solyc10g078400.1.1	Tomato	golgi	60.46	59.25
VIT_08s0040g01260.t01	Wine grape	golgi	59.44	58.54
AT2G41150.2	Thale cress	endoplasmic reticulum, golgi	59.44	57.67
AT3G56750.1	Thale cress	endoplasmic reticulum, golgi, plastid	58.93	57.32
PGSC0003DMT400021597	Potato	golgi	58.67	57.07
Bra004601.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	57.14	56.71
CDX67655	Canola	endoplasmic reticulum, golgi, mitochondrion	58.16	56.58
CDY51258	Canola	endoplasmic reticulum, golgi, mitochondrion	58.16	56.58
CDX79955	Canola	endoplasmic reticulum, golgi, mitochondrion	57.65	56.5
CDY23872	Canola	endoplasmic reticulum, golgi, mitochondrion	57.4	56.39
Bra007268.1-P	Field mustard	golgi	57.4	55.83
CDY65073	Canola	endoplasmic reticulum, golgi	57.14	55.58
CDY27198	Canola	endoplasmic reticulum, golgi, mitochondrion	56.89	54.93
Bra003250.1-P	Field mustard	golgi	48.21	45.32
GSMUA_Achr3P09270_001	Banana	plasma membrane	61.22	36.53
TraesCS7B01G221300.2	Wheat	golgi	15.82	13.11
TraesCS2B01G179800.1	Wheat	endoplasmic reticulum, plastid	17.86	11.93
TraesCS1B01G158900.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	18.88	11.75

Protein Annotations

EnsemblPlants:TraesCS2B01G171800.1	EnsemblPlantsGene:TraesCS2B01G171800	Gene3D:3.40.50.11350	InterPro:GDP-Fuc_O-FucTrfase	PANTHER:PTHR31469	PANTHER:PTHR31469:SF12
PFAM:PF10250	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2B:+:146435615..146438453

Molecular Weight (calculated)

44624.1 Da

IEP (calculated)

9.982

GRAVY (calculated)

-0.278

Length

392 amino acids

Sequence
(BLAST)

001: MAIPYRITGG HSRRSPLPLP TARAILAAVI TGAVLSILCI LSFTHSFSYL GFQPRSVDKR ESSRKYLYWG ARIDCPGKHC SSCAGLGHQE SSLRCALEEA
101: LFLDRIFVMP SRMCLSSVHN TKGIIDSSNA TSNPRWETSY CAMESLYDID LISKTVPVVL DNPRSWYGIV SRSTKLGEGD VAHVQGVSRD ELKFNPLYSD
201: ALLVNRTASP LAWFMECKDR TKRTSVMLPY TFLPTMPARK LRVAARKIKE ILGEYDAIHV RRGDLLKNRK DRFGVERSLH PHLDRDTRPE FIKRRIAKWI
301: PKGRTLFIAS NERTPGFFSP LSDRYKLAYS SNFSSILEPI IENNYQLFMV ERLIMQGAKT FVKTMKELDS DLALCDDPKK NTKVWEVPVY TR

Best Arabidopsis Sequence Match ( AT3G56750.1 )
(BLAST)

001: MATMSKAQRT KPTSGSQRLV LFCIVVFSFL LLFSSVISTG KLGLPYQQTL IDYFVWSPRG KRQHSLSEKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS

Arabidopsis Description

AT3g56750/T8M16_80 [Source:UniProtKB/TrEMBL;Acc:Q9LET2]
SUBAcon: [golgi,endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.