Factsheet for GSMUA_Achr3P09270_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 6
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P27540_001	Banana	cytosol	33.94	76.9
Zm00001d010457_P001	Maize	cytosol	13.85	71.65
KRH71696	Soybean	golgi	39.57	66.67
KRH36835	Soybean	endoplasmic reticulum	38.97	66.49
TraesCS2A01G146500.1	Wheat	endoplasmic reticulum	30.29	66.11
VIT_08s0040g01260.t01	Wine grape	golgi	39.73	65.58
Solyc10g078400.1.1	Tomato	golgi	38.05	62.5
TraesCS2B01G171800.1	Wheat	mitochondrion	36.53	61.22
Os03t0366700-01	Rice	plastid	36.68	61.01
TraesCS2D01G151100.1	Wheat	mitochondrion	36.38	60.97
CDY51258	Canola	endoplasmic reticulum, golgi, mitochondrion	37.29	60.79
Bra004601.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	36.38	60.51
EER97624	Sorghum	mitochondrion	36.53	60.3
PGSC0003DMT400021597	Potato	golgi	36.99	60.3
EER94809	Sorghum	mitochondrion	35.92	60.2
CDX67655	Canola	endoplasmic reticulum, golgi, mitochondrion	36.83	60.05
AT3G56750.1	Thale cress	endoplasmic reticulum, golgi, plastid	36.83	60.05
Zm00001d006931_P002	Maize	plasma membrane	36.07	59.55
CDX79955	Canola	endoplasmic reticulum, golgi, mitochondrion	36.23	59.5
CDY65073	Canola	endoplasmic reticulum, golgi	36.38	59.31
Bra007268.1-P	Field mustard	golgi	36.38	59.31
HORVU2Hr1G026040.3	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	36.23	59.2
CDY23872	Canola	endoplasmic reticulum, golgi, mitochondrion	35.77	58.9
CDY27198	Canola	endoplasmic reticulum, golgi, mitochondrion	36.23	58.62
AT2G41150.2	Thale cress	endoplasmic reticulum, golgi	35.92	58.42
Zm00001d029266_P002	Maize	mitochondrion	36.07	50.11
Bra003250.1-P	Field mustard	golgi	30.14	47.48
Zm00001d022294_P002	Maize	plastid	10.81	42.26
Zm00001d004819_P001	Maize	mitochondrion	17.96	41.4
GSMUA_Achr5P27530_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	9.59	35.8
Zm00001d016377_P001	Maize	nucleus	7.76	35.42
GSMUA_AchrUn_...	Banana	golgi, mitochondrion, plasma membrane	14.16	17.42
GSMUA_Achr4P00760_001	Banana	golgi, plasma membrane	14.61	17.05
GSMUA_Achr6P01490_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	14.46	16.24
GSMUA_Achr5P13200_001	Banana	mitochondrion	12.79	15.94
GSMUA_AchrUn_...	Banana	plastid	13.7	15.31
GSMUA_Achr1P03280_001	Banana	mitochondrion	9.28	14.52

Protein Annotations

Gene3D:2.60.40.420	Gene3D:3.40.50.11350	MapMan:35.2	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0022900	EnsemblPlantsGene:GSMUA_Achr3G09270_001	EnsemblPlants:GSMUA_Achr3P09270_001	EnsemblPlants:GSMUA_Achr3T09270_001
InterPro:IPR003245	InterPro:IPR008972	UniProt:M0SD44	PFAM:PF02298	PFscan:PS51485	PANTHER:PTHR31469
PANTHER:PTHR31469:SF8	InterPro:Phytocyanin_dom	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296B851
SEG:seg	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G09270_001]

Coordinates

chr3:+:6681806..6688642

Molecular Weight (calculated)

73907.7 Da

IEP (calculated)

9.383

GRAVY (calculated)

-0.314

Length

657 amino acids

Sequence
(BLAST)

001: MEQSRSCRVL PPVTCYALCR LLSSLCLILL DSPRANAYQN YTVGDTLGWY DRLQVPQVNY QKWVSGKNFS LGDFLIFNTD KGHTVVQTYN VTTYKRCNYN
101: DAETDDTIEW SAGAPKFSKE KVSIAVPLLK EGMTYFFSGN NDGRQCRHGQ HFKINVTHGQ GLPESLEHQA EAPAQAAPEK GGVVPGEAVP SVPSSFSNPV
201: QAGSVEASSA AGDSLARMLR NQQQRGWRFH LGLSLVGVLL TPRARRNSLC CPLFPKPMAI LRAHRGKHRP RALVVPLLAV SAAAALAVIW FLFFPPMLTS
301: GFSLAPPAAA YASESEGSSG LERKYLYWGS RIDCPGKHCD YCAGLGHQES SLRCALEEAL FLQRVFVMPS RMCINPLHNK KGILHQHSNT SSKERWAANS
401: CPMDSLYDFD LFSSKVQVIL DNSKMWYRIL STSMKLEESG VAHVEGVSRV DLKENTHYSN VLLINRTTNP LAWFMECKDR TNRSSVLLPY SFLPMLAARK
501: LRDAADKIKG LLGDYDAIHV RRGDKIKTRK DQFGVIRTLH PHLDRDTRPE FIQQRIEKWI PAGRTLFIAS NERSPGFFSP LSARYKLAYS SNFSDILDPV
601: IENNYQLFMV ERLVLVGART FVKTFKVDEK DLSLTDDPKK NAKHWQVPIY TMEREGR

Best Arabidopsis Sequence Match ( AT3G56750.1 )
(BLAST)

001: MATMSKAQRT KPTSGSQRLV LFCIVVFSFL LLFSSVISTG KLGLPYQQTL IDYFVWSPRG KRQHSLSEKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS

Arabidopsis Description

AT3g56750/T8M16_80 [Source:UniProtKB/TrEMBL;Acc:Q9LET2]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.