Factsheet for Os03t0366700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010457_P001	Maize	cytosol	27.09	84.25
EER94809	Sorghum	mitochondrion	80.25	80.87
Zm00001d029266_P002	Maize	mitochondrion	82.03	68.5
GSMUA_Achr5P27540_001	Banana	cytosol	47.59	64.83
KRH36835	Soybean	endoplasmic reticulum	61.77	63.38
KRH71696	Soybean	golgi	61.52	62.31
Solyc10g078400.1.1	Tomato	golgi	61.27	60.5
VIT_08s0040g01260.t01	Wine grape	golgi	60.0	59.55
Bra004601.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	58.48	58.48
CDY23872	Canola	endoplasmic reticulum, golgi, mitochondrion	58.73	58.15
CDX79955	Canola	endoplasmic reticulum, golgi, mitochondrion	58.73	58.0
AT2G41150.2	Thale cress	endoplasmic reticulum, golgi	58.23	56.93
AT3G56750.1	Thale cress	endoplasmic reticulum, golgi, plastid	57.97	56.82
PGSC0003DMT400021597	Potato	golgi	57.47	56.33
CDY51258	Canola	endoplasmic reticulum, golgi, mitochondrion	57.22	56.08
Bra007268.1-P	Field mustard	golgi	56.96	55.83
CDY65073	Canola	endoplasmic reticulum, golgi	56.71	55.58
CDX67655	Canola	endoplasmic reticulum, golgi, mitochondrion	56.71	55.58
CDY27198	Canola	endoplasmic reticulum, golgi, mitochondrion	56.71	55.17
Zm00001d004819_P001	Maize	mitochondrion	36.46	50.53
Bra003250.1-P	Field mustard	golgi	45.57	43.17
Zm00001d016377_P001	Maize	nucleus	14.94	40.97
GSMUA_Achr3P09270_001	Banana	plasma membrane	61.01	36.68
Os01t0805100-01	Rice	mitochondrion	13.42	15.59
Os07t0633600-01	Rice	golgi	18.99	12.82
Os10t0456400-01	Rice	golgi, mitochondrion	17.72	10.95

Protein Annotations

Gene3D:3.40.50.11350	MapMan:35.2	EntrezGene:4332916	ProteinID:ABF96132.1	EMBL:AK240950	ProteinID:BAS84325.1
InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:Os03g0366700	EnsemblPlants:Os03t0366700-01	PFAM:PF10250
PANTHER:PTHR31469	PANTHER:PTHR31469:SF12	UniProt:Q10KX9	UniParc:UPI0000DB465F	RefSeq:XP_015627975.1	SEG:seg

Description

Similar to predicted protein. (Os03t0366700-01)

Coordinates

chr3:+:14337121..14341708

Molecular Weight (calculated)

43958.3 Da

IEP (calculated)

10.259

GRAVY (calculated)

-0.336

Length

395 amino acids

Sequence
(BLAST)

001: MAIPPRIAGA GSGGGRKPRM PPLPPARTLL TAFAAAAALA VLCLLSSSSS SSSRTSSLRG SWGSAAAKGG KKYLYWGGRV DCPGKHCGTC AGLGHQESSL
101: RCALEEALFL GRIFVMPSRM CLSSVHNTKG ILHSTNATSE QRWEENSCSM DSLYDIDLIS KIVPVILDNS KTWHEIMSRS MKSDGGMAHV QGIGRAELKD
201: NPLYSKALVI NRTASPLAWF MECKDRKSRS SVMLSYTFLP SMPAKKLRDA ANKMKQILGD YDAIHVRRGD LLKNRKDRFG VERSLHPHLD RDTRPEFIKK
301: RIAKWIPEGR TLFIASNERT PGFFSPLSDK YKLAYSSNFS SILEPVIENN YQLFMVERLM MRGAKTFVKT MKEFDNDLTL CDDPKKNTKV WQIPV

Best Arabidopsis Sequence Match ( AT3G56750.1 )
(BLAST)

001: MATMSKAQRT KPTSGSQRLV LFCIVVFSFL LLFSSVISTG KLGLPYQQTL IDYFVWSPRG KRQHSLSEKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS

Arabidopsis Description

AT3g56750/T8M16_80 [Source:UniProtKB/TrEMBL;Acc:Q9LET2]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.