Factsheet for Bra004601.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
mitochondrion 3
endoplasmic reticulum 3
nucleus 1
extracellular 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79955	Canola	endoplasmic reticulum, golgi, mitochondrion	96.2	95.0
AT2G41150.2	Thale cress	endoplasmic reticulum, golgi	79.24	77.48
Bra007268.1-P	Field mustard	golgi	77.47	75.93
Zm00001d010457_P001	Maize	cytosol	22.78	70.87
GSMUA_Achr5P27540_001	Banana	cytosol	48.35	65.86
KRH36835	Soybean	endoplasmic reticulum	64.05	65.71
KRH71696	Soybean	golgi	64.05	64.87
TraesCS2A01G146500.1	Wheat	endoplasmic reticulum	48.35	63.46
VIT_08s0040g01260.t01	Wine grape	golgi	62.78	62.31
Solyc10g078400.1.1	Tomato	golgi	61.01	60.25
EER94809	Sorghum	mitochondrion	59.24	59.69
PGSC0003DMT400021597	Potato	golgi	60.76	59.55
Bra003250.1-P	Field mustard	golgi	61.77	58.51
Os03t0366700-01	Rice	plastid	58.48	58.48
TraesCS2D01G151100.1	Wheat	mitochondrion	56.96	57.4
TraesCS2B01G171800.1	Wheat	mitochondrion	56.71	57.14
EER97624	Sorghum	mitochondrion	57.47	57.04
HORVU2Hr1G026040.3	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	57.72	56.72
Zm00001d006931_P002	Maize	plasma membrane	56.71	56.28
Zm00001d029266_P002	Maize	mitochondrion	58.99	49.26
Zm00001d004819_P001	Maize	mitochondrion	30.63	42.46
Zm00001d022294_P002	Maize	plastid	17.22	40.48
GSMUA_Achr3P09270_001	Banana	plasma membrane	60.51	36.38
Zm00001d016377_P001	Maize	nucleus	12.91	35.42
Bra000656.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	21.01	14.93
Bra015145.1-P	Field mustard	mitochondrion	19.49	13.73

Protein Annotations

MapMan:35.2	EnsemblPlantsGene:Bra004601	EnsemblPlants:Bra004601.1	EnsemblPlants:Bra004601.1-P	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016757	UniProt:M4CK67	PFAM:PF10250	PANTHER:PTHR31469	PANTHER:PTHR31469:SF8
TMHMM:TMhelix	UniParc:UPI000254759E	SEG:seg	:	:	:

Description

AT2G41150 (E=2e-177) | unknown protein

Coordinates

chrA05:+:989653..991270

Molecular Weight (calculated)

45196.4 Da

IEP (calculated)

9.841

GRAVY (calculated)

-0.443

Length

395 amino acids

Sequence
(BLAST)

001: MATMSKTHRS KPTHGSKRLV LLSLLAVAAL LLLFFSSSFS TRGSGLVDYF SRSSRTKRQH SLSDKYLYWG DRVDCPGKNC ESCAGLGHQE SSLRCALEEA
101: MFLNRTFVMP SQMCINPIHN KKGVLNGSSD NESWEVSSCA MESLYDVDLI SEKIPVILDD SKTWHIVLST GMKLKERGIA HVNGASRREL NDSSHYANLL
201: LINRTASPLA WFVECKDRID RSNVMLPYSF LPSMAAPRLR NAAEKIKAQL GDYDAIHVRR GDKLKTRKDR FNVERTQFPH LDRDTRPEFI MTRIQKQIPP
301: GRTLYIGSNE RAPGFFSPLS ARYKVVYSSN FSEILDPVIE NNYQLFMVER LVMMGAKTFF KTFREYETDL TLTDDPKKNK NWEIPVYTMT KTRKN

Best Arabidopsis Sequence Match ( AT2G41150.2 )
(BLAST)

001: MATMSKPHKL KATPGSQRLV LLCIVAVAFL LLFTSVISTG GLALPYRTTL IGYFVRSTRN KTQHSLSDKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSRMCIN PIHNKKGILN RSNNETREES WEVSSCAMES LYDIDLISEK IPVILDDSET WHIMLSTSMK LKERGSAHVY GANRHELNDS
201: SDFTNLLLIN RTASPLAWFV ECKDRGNRSD VMLPYSFLQT MAASRLRDAA EKIKAKLGDY DAIHVRRGDK LKTRKDRFRV ERSQFPHLDR DTRPEFIIGR
301: IQKQIPPGRT LFIGSNERTP DFFSPLAIRY KVAYSSNFSE ILDPIIENNY QLFMVERLIM MGAKTFFKTF REYETDLTLT DDPKKNKNWE IPVYTMDEGK
401: EAAS

Arabidopsis Description

unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hit /.../7 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). [Source:TAIR;Acc:AT2G41150]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.