Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- golgi 5
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH36835 | Soybean | endoplasmic reticulum | 93.59 | 94.81 |
| VIT_08s0040g01260.t01 | Wine grape | golgi | 77.69 | 76.13 |
| GSMUA_Achr5P27540_001 | Banana | cytosol | 55.64 | 74.83 |
| Zm00001d010457_P001 | Maize | cytosol | 23.85 | 73.23 |
| PGSC0003DMT400021597 | Potato | golgi | 70.26 | 67.99 |
| Solyc10g078400.1.1 | Tomato | golgi | 69.49 | 67.75 |
| TraesCS2A01G146500.1 | Wheat | endoplasmic reticulum | 52.05 | 67.44 |
| AT3G56750.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 67.44 | 65.26 |
| CDY65073 | Canola | endoplasmic reticulum, golgi | 66.41 | 64.27 |
| Bra007268.1-P | Field mustard | golgi | 66.41 | 64.27 |
| Bra004601.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 64.87 | 64.05 |
| CDY51258 | Canola | endoplasmic reticulum, golgi, mitochondrion | 65.64 | 63.52 |
| AT2G41150.2 | Thale cress | endoplasmic reticulum, golgi | 65.64 | 63.37 |
| CDY27198 | Canola | endoplasmic reticulum, golgi, mitochondrion | 65.9 | 63.3 |
| CDX67655 | Canola | endoplasmic reticulum, golgi, mitochondrion | 65.38 | 63.28 |
| CDX79955 | Canola | endoplasmic reticulum, golgi, mitochondrion | 64.87 | 63.25 |
| CDY23872 | Canola | endoplasmic reticulum, golgi, mitochondrion | 64.62 | 63.16 |
| EER94809 | Sorghum | mitochondrion | 62.56 | 62.24 |
| TraesCS2B01G171800.1 | Wheat | mitochondrion | 62.05 | 61.73 |
| Os03t0366700-01 | Rice | plastid | 62.31 | 61.52 |
| TraesCS2D01G151100.1 | Wheat | mitochondrion | 61.79 | 61.48 |
| Zm00001d006931_P002 | Maize | plasma membrane | 62.05 | 60.8 |
| EER97624 | Sorghum | mitochondrion | 61.54 | 60.3 |
| HORVU2Hr1G026040.3 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 61.54 | 59.7 |
| Zm00001d029266_P002 | Maize | mitochondrion | 62.56 | 51.59 |
| Bra003250.1-P | Field mustard | golgi | 52.56 | 49.16 |
| Zm00001d022294_P002 | Maize | plastid | 19.49 | 45.24 |
| Zm00001d004819_P001 | Maize | mitochondrion | 32.05 | 43.86 |
| GSMUA_Achr3P09270_001 | Banana | plasma membrane | 66.67 | 39.57 |
| Zm00001d016377_P001 | Maize | nucleus | 13.59 | 36.81 |
| KRH16980 | Soybean | mitochondrion | 19.49 | 13.36 |
| KRH42826 | Soybean | nucleus | 19.49 | 13.22 |
| KRH72615 | Soybean | mitochondrion | 19.23 | 13.18 |
| KRH58921 | Soybean | endoplasmic reticulum | 18.97 | 12.91 |
Protein Annotations
| EMBL:ACUP02001034 | EnsemblPlants:KRH71696 | EnsemblPlantsGene:GLYMA_02G162900 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0006004 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | GO:GO:0016757 | InterPro:GDP-Fuc_O-FucTrfase |
| PANTHER:PTHR31469 | PANTHER:PTHR31469:SF8 | PFAM:PF10250 | ProteinID:KRH71696 | ProteinID:KRH71696.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0001BA8673 | UniProt:K7K8R3 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr2:-:21654265..21662176
Molecular Weight (calculated)
44402.7 Da
IEP (calculated)
9.539
GRAVY (calculated)
-0.309
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFHRASKAK PKSARSRILL LAAAVTAIAL LFLFSSLLST TVSKANLLQR RQQQPFEKYL YWGTRIDCPG KHCGSCEGLG HQESSLRCAL EEALFLGRTF
101: VMPSRMCINP IHNKKGILHH STNASSEELW DASSCAMDSL YDTELMSDTV PVILDNSKEW YRVLSTSMKL GARGVAHVEG VSRFELKENS RYSDLLLINR
201: TASPLSWFME CKDRNNRSAI MLPYSFLPSM AAGKLRDAAE KIKALLGDYD AIHVRRGDKI KTRKDRFGVA RSLHPHLDRD TRPEFMLCRI AKWVPPGRTL
301: FIASNERTPG FFSPLSARYR LAYSSNYSHI LDPLIENNYQ LFMIERLIMM GGKTFIRTFK EDETDLSLTD DPKKNTKLWQ IPVYNVDETC
101: VMPSRMCINP IHNKKGILHH STNASSEELW DASSCAMDSL YDTELMSDTV PVILDNSKEW YRVLSTSMKL GARGVAHVEG VSRFELKENS RYSDLLLINR
201: TASPLSWFME CKDRNNRSAI MLPYSFLPSM AAGKLRDAAE KIKALLGDYD AIHVRRGDKI KTRKDRFGVA RSLHPHLDRD TRPEFMLCRI AKWVPPGRTL
301: FIASNERTPG FFSPLSARYR LAYSSNYSHI LDPLIENNYQ LFMIERLIMM GGKTFIRTFK EDETDLSLTD DPKKNTKLWQ IPVYNVDETC
001: MATMSKAQRT KPTSGSQRLV LFCIVVFSFL LLFSSVISTG KLGLPYQQTL IDYFVWSPRG KRQHSLSEKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS
Arabidopsis Description
AT3g56750/T8M16_80 [Source:UniProtKB/TrEMBL;Acc:Q9LET2]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.