Factsheet for HORVU2Hr1G026040.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plastid

Predictor Summary:

plastid 2
endoplasmic reticulum 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G146500.1	Wheat	endoplasmic reticulum	70.65	94.35
TraesCS2D01G151100.1	Wheat	mitochondrion	87.56	89.8
TraesCS2B01G171800.1	Wheat	mitochondrion	87.56	89.8
EER97624	Sorghum	mitochondrion	77.86	78.64
Zm00001d006931_P002	Maize	plasma membrane	76.37	77.14
GSMUA_Achr5P27540_001	Banana	cytosol	48.51	67.24
KRH36835	Soybean	endoplasmic reticulum	59.45	62.08
KRH71696	Soybean	golgi	59.7	61.54
Solyc10g078400.1.1	Tomato	golgi	58.46	58.75
VIT_08s0040g01260.t01	Wine grape	golgi	57.46	58.04
AT2G41150.2	Thale cress	endoplasmic reticulum, golgi	58.21	57.92
Bra004601.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	56.72	57.72
AT3G56750.1	Thale cress	endoplasmic reticulum, golgi, plastid	57.21	57.07
CDX79955	Canola	endoplasmic reticulum, golgi, mitochondrion	56.72	57.0
CDY23872	Canola	endoplasmic reticulum, golgi, mitochondrion	56.47	56.89
PGSC0003DMT400021597	Potato	golgi	56.97	56.82
CDY51258	Canola	endoplasmic reticulum, golgi, mitochondrion	56.72	56.58
CDX67655	Canola	endoplasmic reticulum, golgi, mitochondrion	56.72	56.58
CDY65073	Canola	endoplasmic reticulum, golgi	55.47	55.34
Bra007268.1-P	Field mustard	golgi	55.47	55.34
CDY27198	Canola	endoplasmic reticulum, golgi, mitochondrion	54.98	54.43
Bra003250.1-P	Field mustard	golgi	47.26	45.56
GSMUA_Achr3P09270_001	Banana	plasma membrane	59.2	36.23
HORVU2Hr1G028070.1	Barley	endoplasmic reticulum, plastid	17.66	18.35
HORVU7Hr1G076590.2	Barley	endoplasmic reticulum, golgi	15.17	12.32

Protein Annotations

EnsemblPlants:HORVU2Hr1G026040.3	EnsemblPlantsGene:HORVU2Hr1G026040	Gene3D:3.40.50.11350	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	InterPro:GDP-Fuc_O-FucTrfase
PANTHER:PTHR31469	PANTHER:PTHR31469:SF12	PFAM:PF10250	SEG:seg	UniParc:UPI000B46DC88	UniProt:A0A287HG03
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:82525824..82529136

Molecular Weight (calculated)

45520.0 Da

IEP (calculated)

9.666

GRAVY (calculated)

-0.282

Length

402 amino acids

Sequence
(BLAST)

001: SRSIGPLLPP MAIPYRITGG HSRRSPLPLP TARALLAAVF TGAVLSILCV LSFTDSFSYL GFQPTSVDKR ESSRQYLYWG ARIDCPGKHC SSCAGLGHQE
101: SSLRCALEEA LFLDRIFVMP SRMCLSSVHN TKGIIDSSNA TSNPRWETSY CAMESLYDID LISKTVPVVL DNPRSWYGIV SRSTKLGEGD VAHVQGVSRD
201: ELKDNPLYSD ALLVNRTASP LAWFMECKDR TKRSSVMLPY TFLPTMPARK LRVAAHKIKE ILGEYDAIHV RRGDLLKNRK DRFGVERSLH PHLDRDTRPE
301: YIKRRIAKWI PKGRTLFIAS NERAPGFFSP LSDRYKLAYS SNFSSILEPV IENNYQLFMV ERLIMQGAKT FVKTMKELDS DLALCDDPKK NTKIWEIPVY
401: TR

Best Arabidopsis Sequence Match ( AT3G56750.1 )
(BLAST)

001: MATMSKAQRT KPTSGSQRLV LFCIVVFSFL LLFSSVISTG KLGLPYQQTL IDYFVWSPRG KRQHSLSEKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS

Arabidopsis Description

AT3g56750/T8M16_80 [Source:UniProtKB/TrEMBL;Acc:Q9LET2]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.