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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 3
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 2
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:golgi
 plasma membrane: 27341663
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER97624 Sorghum mitochondrion 94.72 94.72
TraesCS2A01G146500.1 Wheat endoplasmic reticulum 61.81 81.73
Zm00001d010457_P001 Maize cytosol 25.88 81.1
TraesCS2B01G171800.1 Wheat mitochondrion 76.63 77.81
TraesCS2D01G151100.1 Wheat mitochondrion 76.38 77.55
HORVU2Hr1G026040.3 Barley endoplasmic reticulum, golgi, mitochondrion, plastid 77.14 76.37
GSMUA_Achr5P27540_001 Banana cytosol 49.25 67.59
KRH36835 Soybean endoplasmic reticulum 60.05 62.08
KRH71696 Soybean golgi 60.8 62.05
Zm00001d022294_P002 Maize plastid 24.87 58.93
Zm00001d029266_P002 Maize mitochondrion 69.85 58.77
Solyc10g078400.1.1 Tomato golgi 58.54 58.25
VIT_08s0040g01260.t01 Wine grape golgi 57.79 57.79
AT2G41150.2 Thale cress endoplasmic reticulum, golgi 58.04 57.18
Bra004601.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion 56.28 56.71
CDX79955 Canola endoplasmic reticulum, golgi, mitochondrion 56.53 56.25
CDY23872 Canola endoplasmic reticulum, golgi, mitochondrion 56.03 55.89
AT3G56750.1 Thale cress endoplasmic reticulum, golgi, plastid 56.53 55.83
PGSC0003DMT400021597 Potato golgi 56.53 55.83
CDY65073 Canola endoplasmic reticulum, golgi 56.28 55.58
CDY51258 Canola endoplasmic reticulum, golgi, mitochondrion 56.28 55.58
Bra007268.1-P Field mustard golgi 56.28 55.58
CDY27198 Canola endoplasmic reticulum, golgi, mitochondrion 56.03 54.93
CDX67655 Canola endoplasmic reticulum, golgi, mitochondrion 55.53 54.84
Zm00001d004819_P001 Maize mitochondrion 35.18 49.12
Bra003250.1-P Field mustard golgi 45.48 43.41
Zm00001d016377_P001 Maize nucleus 14.57 40.28
GSMUA_Achr3P09270_001 Banana plasma membrane 59.55 36.07
Zm00001d006021_P001 Maize cytosol 3.02 18.18
Zm00001d019764_P001 Maize golgi, mitochondrion 15.33 13.38
Zm00001d022247_P001 Maize plasma membrane 17.59 12.05
Zm00001d032819_P001 Maize plasma membrane 18.34 11.46
Protein Annotations
Gene3D:3.40.50.11350MapMan:35.2UniProt:B8A0U6EMBL:BT055188InterPro:GDP-Fuc_O-FucTrfaseGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005975GO:GO:0006004GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757ProteinID:ONM25513.1PFAM:PF10250
PANTHER:PTHR31469PANTHER:PTHR31469:SF8TMHMM:TMhelixUniParc:UPI0001917348EnsemblPlantsGene:Zm00001d006931EnsemblPlants:Zm00001d006931_P002
EnsemblPlants:Zm00001d006931_T002SEG:seg::::
Description
calcium ion binding
Coordinates
chr2:-:219610351..219613723
Molecular Weight (calculated)
45254.6 Da
IEP (calculated)
9.895
GRAVY (calculated)
-0.388
Length
398 amino acids
Sequence
(BLAST)
001: MAIHPRTTGG RRQPLPLPLK GALLAAIAVA TALSVLFVLS FTDTLTFTDT LPYLGFRPRD VDKRDGNRRY LYWGSRVDCP GKHCGSCAGL GHQESSLRCA
101: LEEALFLDRV LVMPAKMCLS SVHNTKGVLQ SSNATSQQRW ETGSCAMESL YDIDLISRTV PVILDNPRSW YEIISRSTKL GEDGLVVHVQ GVSRAELKQN
201: SNYSGALLIN RTASPLAWFM ECKDRTKRSS VMLPYTFLPT MATRKLRDAA NKMKEILGDY DAIHVRRGDL LKNRKDRFGV ERSLHPHLDR DTRPEFIKKR
301: IAKWIRPGRT LFISSNERTP GFFSSLSDKY RLAYSSNFSS ILNPIVKNNY QLFMVERLIM QGARTFVKTM KEFDEDLALC DDPKKNTKDW REPVYTDD
Best Arabidopsis Sequence Match ( AT2G41150.2 )
(BLAST)
001: MATMSKPHKL KATPGSQRLV LLCIVAVAFL LLFTSVISTG GLALPYRTTL IGYFVRSTRN KTQHSLSDKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSRMCIN PIHNKKGILN RSNNETREES WEVSSCAMES LYDIDLISEK IPVILDDSET WHIMLSTSMK LKERGSAHVY GANRHELNDS
201: SDFTNLLLIN RTASPLAWFV ECKDRGNRSD VMLPYSFLQT MAASRLRDAA EKIKAKLGDY DAIHVRRGDK LKTRKDRFRV ERSQFPHLDR DTRPEFIIGR
301: IQKQIPPGRT LFIGSNERTP DFFSPLAIRY KVAYSSNFSE ILDPIIENNY QLFMVERLIM MGAKTFFKTF REYETDLTLT DDPKKNKNWE IPVYTMDEGK
401: EAAS
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hit /.../7 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). [Source:TAIR;Acc:AT2G41150]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.