Factsheet for Zm00001d019764_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89047	Sorghum	endoplasmic reticulum, golgi, vacuole	88.16	84.1
Os01t0805100-01	Rice	mitochondrion	51.54	69.12
TraesCS7D01G317200.1	Wheat	golgi	71.27	68.71
TraesCS7A01G320300.1	Wheat	golgi	71.27	68.71
TraesCS7B01G221300.2	Wheat	golgi	70.83	68.29
HORVU7Hr1G076590.2	Barley	endoplasmic reticulum, golgi	69.74	64.24
CDY27873	Canola	mitochondrion	42.98	36.98
Bra015145.1-P	Field mustard	mitochondrion	43.2	35.12
AT4G12700.1	Thale cress	mitochondrion	43.2	35.12
CDY00855	Canola	mitochondrion	43.2	34.87
VIT_12s0057g01310.t01	Wine grape	mitochondrion	42.54	34.83
AT2G04280.1	Thale cress	mitochondrion	42.32	33.98
KRH16980	Soybean	mitochondrion	41.67	33.39
KRH72615	Soybean	mitochondrion	41.45	33.22
Solyc07g045210.1.1	Tomato	golgi, mitochondrion	42.32	33.16
PGSC0003DMT400074186	Potato	cytosol, golgi, mitochondrion, plasma membrane	41.89	33.16
Solyc12g006200.1.1	Tomato	golgi, mitochondrion, nucleus, plasma membrane	41.89	33.1
PGSC0003DMT400044798	Potato	golgi, mitochondrion	42.11	32.99
Zm00001d032819_P001	Maize	plasma membrane	41.89	29.98
Zm00001d022247_P001	Maize	plasma membrane	32.24	25.3
Zm00001d006021_P001	Maize	cytosol	2.85	19.7
Zm00001d016377_P001	Maize	nucleus	5.48	17.36
Zm00001d006931_P002	Maize	plasma membrane	13.38	15.33
Zm00001d029266_P002	Maize	mitochondrion	14.04	13.53
Zm00001d010457_P001	Maize	cytosol	3.73	13.39
Zm00001d022294_P002	Maize	plastid	4.61	12.5
Zm00001d004819_P001	Maize	mitochondrion	7.68	12.28

Protein Annotations

EnsemblPlants:Zm00001d019764_P001	EnsemblPlants:Zm00001d019764_T001	EnsemblPlantsGene:Zm00001d019764	PANTHER:PTHR31469	PANTHER:PTHR31469:SF7	ProteinID:ONM53713.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002212300	UniProt:A0A1D6I0A7	MapMan:35.2	:

Description

calcium ion binding

Coordinates

chr7:-:57843139..57844509

Molecular Weight (calculated)

51180.5 Da

IEP (calculated)

7.992

GRAVY (calculated)

-0.279

Length

456 amino acids

Sequence
(BLAST)

001: MDPNRPPLGR RAFLSSSVHA ATALLSILLL VTLLRLPLST SPHAASTIAD QKPKEQTCDP TSPLDCADPR LFHLMMRSAI EAFPAVHFAR FGRPVPGDPP
101: SSSCDMAWRS RSDFDSPSKA TTKDYRRFAI GRDPHTCAYS VLSIGDYHSG PNARKPRRGA TNATIATPPP PALSRSQFAK GAYLAYLGGG DRCKPMPHYL
201: RSLLCALAEA RYLNRTLVLD LTLCLAASYA APGTGEMPEE GKRLAFYIDV EHLHSQVPII EERQFWADWD SWGVQGQLRA HLIEDTRLAL IKFSKVKDTL
301: IIRKFGDVEP GNYWYNVCEG EAKHLLSPLH WVIRWTPSLM HIVDDILSRM QPDFDSVHID AKGEDLRQRV EEVLGGGRQV YVAGVGVNRA LLESLKEKCI
401: VHYLDEFEDL WGTDSKWFLE MKRLNGGVPV EFDGYMRDVV DREVFLKGKK KVEVLR

Best Arabidopsis Sequence Match ( AT4G12700.1 )
(BLAST)

001: MSGRSAFSRT GGFRPENLGQ NAVSLIGSIG FSVLVIGVVV FTIIAATYEP EDPLFHPSDK ITTFLTSNSN ATLKSDDSIV KTGEDFMAAN QTAFGGFINI
101: ADVETSENDS DGNQLDCDTN IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY KDYRRFVIEK SGNCSVSVMG
201: IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS
301: VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW
401: NLLWKSKRLM EIVSAIASRL NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN PLKDKYKPHF LDEFKDLWDE
501: SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE TFNDLTNDCR DGIGTCNVAA S

Arabidopsis Description

At4g12700 [Source:UniProtKB/TrEMBL;Acc:Q9SU16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.