Factsheet for Zm00001d022247_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99762	Sorghum	cytosol, endoplasmic reticulum, nucleus, plastid	89.5	88.89
HORVU2Hr1G028070.1	Barley	endoplasmic reticulum, plastid	56.8	85.27
Os07t0633600-01	Rice	golgi	84.17	83.59
TraesCS2B01G179800.1	Wheat	endoplasmic reticulum, plastid	82.62	81.77
TraesCS2A01G154600.1	Wheat	unclear	80.55	80.41
GSMUA_Achr4P00760_001	Banana	golgi, plasma membrane	61.96	63.94
GSMUA_Achr6P01490_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	61.45	61.03
VIT_06s0004g00600.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	57.49	59.86
PGSC0003DMT400082037	Potato	endoplasmic reticulum, plasma membrane	56.28	59.13
KRH58921	Soybean	endoplasmic reticulum	57.66	58.46
CDX90695	Canola	endoplasmic reticulum, golgi, plastid	55.42	58.44
KRH42826	Soybean	nucleus	57.66	58.26
AT4G08810.1	Thale cress	endoplasmic reticulum, golgi, plastid	55.25	58.15
Bra000656.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	55.59	58.09
CDY05025	Canola	endoplasmic reticulum, golgi, plastid	55.42	57.81
Solyc01g005690.2.1	Tomato	plastid	36.32	47.63
Zm00001d032819_P001	Maize	plasma membrane	42.51	38.78
Zm00001d019764_P001	Maize	golgi, mitochondrion	25.3	32.24
Zm00001d010457_P001	Maize	cytosol	4.99	22.83
Zm00001d016377_P001	Maize	nucleus	4.82	19.44
Zm00001d006931_P002	Maize	plasma membrane	12.05	17.59
Zm00001d022294_P002	Maize	plastid	4.99	17.26
Zm00001d006021_P001	Maize	cytosol	1.89	16.67
Zm00001d004819_P001	Maize	mitochondrion	8.09	16.49
Zm00001d029266_P002	Maize	mitochondrion	12.22	15.01

Protein Annotations

MapMan:35.2	UniProt:A0A1D6IKL7	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0042175	ProteinID:ONM59946.1	PFAM:PF10250	PANTHER:PTHR31469
PANTHER:PTHR31469:SF2	TMHMM:TMhelix	UniParc:UPI000220BC1F	EnsemblPlantsGene:Zm00001d022247	EnsemblPlants:Zm00001d022247_P001	EnsemblPlants:Zm00001d022247_T001
SEG:seg	:	:	:	:	:

Description

calcium ion binding

Coordinates

chr7:-:173562438..173564183

Molecular Weight (calculated)

65494.4 Da

IEP (calculated)

8.863

GRAVY (calculated)

-0.486

Length

581 amino acids

Sequence
(BLAST)

001: MSSSDPDDAP DGGEDSPLFR RSGGPSSGGT VGDVPVSQSL IKAASNVCFS LFVLAVLVVT VVAVTYQPPD PWLQSSAAIT TSLSRVLPNS TFLVPDDSLL
101: PTGEDFNSST AVPAPVRDDD DAAAAVSAAS AAAAGNRTCD PDAPLNCSDP RVLAAVKAFN ARAFFRKSIV FLSYEAPVSG PKPGQCDVAW RFRNRREKSW
201: RRYRDYRRFS LASGDGCALD IVSVGKFRSG TNAARRPYPK GSKSKRPRVS PPPVDAEIND TIPVVGSEAE FKKGKYLYYM RGGDHCKSMN QFVWSFLCGL
301: GEAKFLNRTF VMDLNICLSG AHTVDGKDVD GKDFRYYFDF EHLKESVPVV EEGDFLKDWK RWDKKKGPGR ITVRKVPSYK VTPMQLKRDK SNIIWRQFNG
401: HEPENYWYRV CEGRAAKVIQ RPWYAIWKSK RLMNIVTEIA GRMDWDYDGL HVVRGWKAQN KQMYPNLDSD TSPDALVDKV TKLVKPMRDL YIATNEPFYN
501: YFDKLRSHFH VHLLDDYKEL WSNTSEWYNE TTTLSRGKPV PFDAYMRVIV DTEVFYRSKT QVETFNNLTR DCKDGINTCN L

Best Arabidopsis Sequence Match ( AT4G08810.1 )
(BLAST)

001: MKESDLTTEP IAQNLIKLIS NVCFSVFVFT VLIFTVIAVT YQPPDPWLES APALTKLLTE TENATFKIDG SILKTGEDLA SSPSSSPPSN STEQVTEATI
101: EKSEAKIGNM TVKNSIDCDE DLKIVNCSDP RVLVAVERFN LKVFKSIVFL EYETPVNGSK LDECDVSWRF RNKKEKSWRR YRDFRRFRFG FGENCTYKVF
201: HTSGWHSGVN ARRPRISRPS SSRGARGGDS EINDTIPTLG SQTSFRRGKY LYYSRGGDYC KGMNQYMWSF LCGLGEAMYL NRTFVMDLSL CLSSSYSSKG
301: KDEEGKDFRY YFDFEHLKET ASIVEEGEFL RDWKKWNRLH KRKVPVRKVK THRVSPLQLS KDKSTIIWRQ FDTPEPENYW YRVCEGQASK YVERPWHALW
401: KSKRLMNIVS EISGKMDWDF DAVHVVRGEK AKNKKLWPHL DADTWPDAIL TKLKGLVQVW RNLYVATNEP FYNYFDKLRS QYKVHLLDDY SYLWGNKSEW
501: YNETSLLNNG KPVEFDGYMR VAVDTEVFYR GKTRVETFYN LTTDCKDGIN TC

Arabidopsis Description

SUB1SUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWI5]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.