Factsheet for GSMUA_Achr4P00760_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 2
golgi 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	golgi, nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P01490_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	81.71	78.63
HORVU2Hr1G028070.1	Barley	endoplasmic reticulum, plastid	47.96	69.77
VIT_06s0004g00600.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	64.3	64.87
Zm00001d022247_P001	Maize	plasma membrane	63.94	61.96
CDX90695	Canola	endoplasmic reticulum, golgi, plastid	60.39	61.71
TraesCS2B01G179800.1	Wheat	endoplasmic reticulum, plastid	64.12	61.5
KRH58921	Soybean	endoplasmic reticulum	62.52	61.43
AT4G08810.1	Thale cress	endoplasmic reticulum, golgi, plastid	60.21	61.41
Bra000656.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	60.57	61.33
TraesCS2A01G154600.1	Wheat	unclear	63.23	61.17
PGSC0003DMT400082037	Potato	endoplasmic reticulum, plasma membrane	60.04	61.12
CDY05025	Canola	endoplasmic reticulum, golgi, plastid	60.39	61.04
EER99762	Sorghum	cytosol, endoplasmic reticulum, nucleus, plastid	63.23	60.85
KRH42826	Soybean	nucleus	61.99	60.7
Os07t0633600-01	Rice	golgi	63.06	60.68
Solyc01g005690.2.1	Tomato	plastid	37.48	47.63
GSMUA_AchrUn_...	Banana	golgi, mitochondrion, plasma membrane	42.98	45.32
GSMUA_Achr5P13200_001	Banana	mitochondrion	42.1	44.97
GSMUA_AchrUn_...	Banana	plastid	43.69	41.84
GSMUA_Achr1P03280_001	Banana	mitochondrion	30.73	41.19
GSMUA_Achr5P27530_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	5.51	17.61
GSMUA_Achr5P27540_001	Banana	cytosol	8.88	17.24
GSMUA_Achr3P09270_001	Banana	plasma membrane	17.05	14.61

Protein Annotations

EnsemblPlants:GSMUA_Achr4P00760_001	EnsemblPlants:GSMUA_Achr4T00760_001	EnsemblPlantsGene:GSMUA_Achr4G00760_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	InterPro:GDP-Fuc_O-FucTrfase	PANTHER:PTHR31469	PANTHER:PTHR31469:SF2	PFAM:PF10250
SEG:seg	TMHMM:TMhelix	UniParc:UPI000295EC89	UniProt:M0SJZ3	MapMan:35.2	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G00760_001]

Coordinates

chr4:-:664008..665699

Molecular Weight (calculated)

64405.8 Da

IEP (calculated)

7.851

GRAVY (calculated)

-0.537

Length

563 amino acids

Sequence
(BLAST)

001: MKRSRGGGSA TAADREVPLS QKAVKLVGNV CFSLFVLSVL IFTIVSITYQ PPDPWFDSPK AIISKSLAAT LPNATFRTDD SVLQTGEDLV PLTAADNSTT
101: AIADDDNASS AAIVLPSLAP DCDPDAPLNC SDPRVLAAIQ RFNTRIFHRS IIFLSYETPV SGSAPWECDA AWRFRNHREK SWRRYKDYRR FRLAPADNCT
201: YEVVSAGKFR SGVNAAPKPP LRRQSSSRAP PSQIADAEIN DTIPTLGSES NFRKGKYLYY TRGGDYCKGM NQYLWSFLCA LGEAQFLNRT FVMDLNVCLA
301: ATYNPSGRDE EGKDFRYYFD FEHLKESASV VEESEFLRDW QQWDRATSRK AGGKISVLKV PTYKVTPMQL KKDPSTIIWR QFDGPEPENY WYRVCEGRSA
401: KYIQRPWEAI WKSKRLMNIV SEIAGQMDWE YDGIHVVRGE KARNKELWPN LDADTSPEAL VQKLTKVIHQ WRNLYIATNE PFYNYFDKLR SHYKVHLLDD
501: YKEMWGNTSE WYNETMALNN GHPVEFDGYM RVAVDTEVLY RAKNRVETFN NLTRDCKDGI NTC

Best Arabidopsis Sequence Match ( AT4G08810.1 )
(BLAST)

001: MKESDLTTEP IAQNLIKLIS NVCFSVFVFT VLIFTVIAVT YQPPDPWLES APALTKLLTE TENATFKIDG SILKTGEDLA SSPSSSPPSN STEQVTEATI
101: EKSEAKIGNM TVKNSIDCDE DLKIVNCSDP RVLVAVERFN LKVFKSIVFL EYETPVNGSK LDECDVSWRF RNKKEKSWRR YRDFRRFRFG FGENCTYKVF
201: HTSGWHSGVN ARRPRISRPS SSRGARGGDS EINDTIPTLG SQTSFRRGKY LYYSRGGDYC KGMNQYMWSF LCGLGEAMYL NRTFVMDLSL CLSSSYSSKG
301: KDEEGKDFRY YFDFEHLKET ASIVEEGEFL RDWKKWNRLH KRKVPVRKVK THRVSPLQLS KDKSTIIWRQ FDTPEPENYW YRVCEGQASK YVERPWHALW
401: KSKRLMNIVS EISGKMDWDF DAVHVVRGEK AKNKKLWPHL DADTWPDAIL TKLKGLVQVW RNLYVATNEP FYNYFDKLRS QYKVHLLDDY SYLWGNKSEW
501: YNETSLLNNG KPVEFDGYMR VAVDTEVFYR GKTRVETFYN LTTDCKDGIN TC

Arabidopsis Description

SUB1SUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWI5]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.