Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 2
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P03280_001 | Banana | mitochondrion | 54.84 | 68.81 |
| GSMUA_AchrUn_... | Banana | golgi, mitochondrion, plasma membrane | 65.28 | 64.42 |
| GSMUA_AchrUn_... | Banana | plastid | 66.22 | 59.35 |
| TraesCS1D01G141700.1 | Wheat | mitochondrion | 65.09 | 54.97 |
| TraesCS1A01G142900.1 | Wheat | unclear | 64.52 | 54.49 |
| TraesCS1B01G158900.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 64.71 | 54.13 |
| Os10t0456400-01 | Rice | golgi, mitochondrion | 65.28 | 53.83 |
| EER94138 | Sorghum | mitochondrion | 63.95 | 52.9 |
| Zm00001d032819_P001 | Maize | plasma membrane | 63.95 | 52.9 |
| GSMUA_Achr4P00760_001 | Banana | golgi, plasma membrane | 44.97 | 42.1 |
| GSMUA_Achr6P01490_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 45.35 | 40.85 |
| GSMUA_Achr5P27530_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 7.02 | 21.02 |
| GSMUA_Achr5P27540_001 | Banana | cytosol | 7.97 | 14.48 |
| GSMUA_Achr3P09270_001 | Banana | plasma membrane | 15.94 | 12.79 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P13200_001 | EnsemblPlants:GSMUA_Achr5T13200_001 | EnsemblPlantsGene:GSMUA_Achr5G13200_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR31469 | PANTHER:PTHR31469:SF2 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002958C81 | UniProt:M0SY49 |
| MapMan:35.2 | : | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G13200_001]
Coordinates
chr5:-:9451192..9453126
Molecular Weight (calculated)
59031.7 Da
IEP (calculated)
4.730
GRAVY (calculated)
-0.177
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGGRTLSHL SSGALRVGGV GSGGGNLCFA LFVVAVLIFT IIAATYQPDD PLLHSSAADS RLASFLTSTS NATFLSDPSV LRTGEDFLNS SSNSTSAAVG
101: TEAAAFIELS DINSTAASAA VVPVCDPAAP VDCADPELFH LLMRAAIEAL PDIHFYRFGK PVAVPGGPGS CDMAWRFRPK DATRPMFYRD YRRFHLTQSA
201: NCVLSVSKVD DFHSGTTAAV PVVGEPVNDT LPVIDSESAF ASGRYLIYMS GGDRCKSMNH YLWSFLCALG EAQYLNRTLV MDMKICLSSM YTLTGHNEED
301: KDFRLYFDFE HLKHSTPVID QGQFWTDWGK WHEKDGLSLY YVDDFKVTPM KLADVKDALI MRKFDDVKPD NYWYRVCEGE TESVIQRPWQ LLWKSRRLME
401: IVSAIASRMN WDFDSVHISL LVTLKDKIEE GRHLYIATNE PDTSFFEPLK EAYTTYFLDD FKDLWGENSE WYLETKELNN GVPVEFDGYM RVEVDTEVFL
501: RGKKQLETFN DLTNDCKDGV HTCPTSS
101: TEAAAFIELS DINSTAASAA VVPVCDPAAP VDCADPELFH LLMRAAIEAL PDIHFYRFGK PVAVPGGPGS CDMAWRFRPK DATRPMFYRD YRRFHLTQSA
201: NCVLSVSKVD DFHSGTTAAV PVVGEPVNDT LPVIDSESAF ASGRYLIYMS GGDRCKSMNH YLWSFLCALG EAQYLNRTLV MDMKICLSSM YTLTGHNEED
301: KDFRLYFDFE HLKHSTPVID QGQFWTDWGK WHEKDGLSLY YVDDFKVTPM KLADVKDALI MRKFDDVKPD NYWYRVCEGE TESVIQRPWQ LLWKSRRLME
401: IVSAIASRMN WDFDSVHISL LVTLKDKIEE GRHLYIATNE PDTSFFEPLK EAYTTYFLDD FKDLWGENSE WYLETKELNN GVPVEFDGYM RVEVDTEVFL
501: RGKKQLETFN DLTNDCKDGV HTCPTSS
001: MSGRSAFSRT GGFRPENLGQ NAVSLIGSIG FSVLVIGVVV FTIIAATYEP EDPLFHPSDK ITTFLTSNSN ATLKSDDSIV KTGEDFMAAN QTAFGGFINI
101: ADVETSENDS DGNQLDCDTN IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY KDYRRFVIEK SGNCSVSVMG
201: IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS
301: VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW
401: NLLWKSKRLM EIVSAIASRL NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN PLKDKYKPHF LDEFKDLWDE
501: SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE TFNDLTNDCR DGIGTCNVAA S
101: ADVETSENDS DGNQLDCDTN IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY KDYRRFVIEK SGNCSVSVMG
201: IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS
301: VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW
401: NLLWKSKRLM EIVSAIASRL NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN PLKDKYKPHF LDEFKDLWDE
501: SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE TFNDLTNDCR DGIGTCNVAA S
Arabidopsis Description
At4g12700 [Source:UniProtKB/TrEMBL;Acc:Q9SU16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.