Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- nucleus 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G141700.1 | Wheat | mitochondrion | 81.53 | 83.49 |
| TraesCS1A01G142900.1 | Wheat | unclear | 80.75 | 82.69 |
| TraesCS1B01G158900.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 81.22 | 82.38 |
| EER94138 | Sorghum | mitochondrion | 81.69 | 81.95 |
| Zm00001d032819_P001 | Maize | plasma membrane | 81.38 | 81.63 |
| GSMUA_Achr5P13200_001 | Banana | mitochondrion | 53.83 | 65.28 |
| VIT_12s0057g01310.t01 | Wine grape | mitochondrion | 52.43 | 60.14 |
| GSMUA_Achr1P03280_001 | Banana | mitochondrion | 39.28 | 59.76 |
| KRH16980 | Soybean | mitochondrion | 53.21 | 59.75 |
| KRH72615 | Soybean | mitochondrion | 52.74 | 59.23 |
| CDY27873 | Canola | mitochondrion | 48.98 | 59.06 |
| Solyc07g045210.1.1 | Tomato | golgi, mitochondrion | 53.68 | 58.93 |
| PGSC0003DMT400044798 | Potato | golgi, mitochondrion | 53.52 | 58.76 |
| Solyc12g006200.1.1 | Tomato | golgi, mitochondrion, nucleus, plasma membrane | 52.74 | 58.41 |
| Bra015145.1-P | Field mustard | mitochondrion | 51.02 | 58.11 |
| PGSC0003DMT400074186 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 52.27 | 57.99 |
| AT2G04280.1 | Thale cress | mitochondrion | 51.33 | 57.75 |
| CDY00855 | Canola | mitochondrion | 50.7 | 57.35 |
| AT4G12700.1 | Thale cress | mitochondrion | 50.08 | 57.04 |
| Os07t0633600-01 | Rice | golgi | 38.65 | 42.22 |
| Os01t0805100-01 | Rice | mitochondrion | 21.91 | 41.18 |
| Os03t0366700-01 | Rice | plastid | 10.95 | 17.72 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4348793 | ProteinID:AAP54086.1 | EMBL:AK101916 | ProteinID:BAF26668.1 | ProteinID:BAT11129.1 |
| InterPro:GDP-Fuc_O-FucTrfase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006004 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 |
| EnsemblPlantsGene:Os10g0456400 | EnsemblPlants:Os10t0456400-01 | PFAM:PF10250 | PANTHER:PTHR31469 | PANTHER:PTHR31469:SF2 | UniProt:Q7XDQ5 |
| TMHMM:TMhelix | UniParc:UPI00001A3CE2 | RefSeq:XP_015614735.1 | SEG:seg | : | : |
Description
Conserved hypothetical protein. (Os10t0456400-01);Conserved hypothetical protein. (Os10t0456400-02)
Coordinates
chr10:+:16675581..16677867
Molecular Weight (calculated)
71105.3 Da
IEP (calculated)
5.377
GRAVY (calculated)
-0.459
Length
639 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGRAGALSA ARWRGGAGTG TGIGIDLRAA LRSGGNLLFA LFVAAVLAFT LLAAVHSPDD PLLHPSSHQL TAFLTSATSN STFLADDSVL RTGEDFAAAI
101: GANSSDAAAA AEATVVAEAV PFIKLEDVAT KEESSGAERA VTVDTDASSD AGAAAEENPI VEAVSCDTEA PVDCTGDKDL FNLLMRTAIE KFSDLHFYRF
201: GRPVAVPGSP MECDLAWRFR PAEDTNGRTT YYKDYRRFTL TRDVNTCNLV VGNVGEYHSG TGAKRSGRRK GKKGKKGKRE APVTDFVPAK TQMRLDENAA
301: NADTTAASEP ELVVGEAVND NLPVVESESE FSRGKYLIYM GGGERCKSMN HYVWGFLCAL GEAQYLNRTL VMDLNVCLNS RYTSSGKDEE RDFRLYFDFE
401: HLKQSASVID QSQFWTDWGK WHKKDRLKNH YTEDIKVTPM QLRDVKDTLI MRKFGNVEPD NFWSRVCEGE TEAVIKRPWY LLWKSRRLME IVSAISSRMD
501: WDFDSVHVVR GEKAQNKQLW PNLDRDTSPD SLLTTLNDKV GAGRHLYIAT NEPDKSFFDP MKGKYRTHFL DDFKDLWDEN SEWYTETKEL SNGNAVEFDG
601: YMRVAVDTEV FLRGKRKLET FSDLTRDCKN GVNTCPASS
101: GANSSDAAAA AEATVVAEAV PFIKLEDVAT KEESSGAERA VTVDTDASSD AGAAAEENPI VEAVSCDTEA PVDCTGDKDL FNLLMRTAIE KFSDLHFYRF
201: GRPVAVPGSP MECDLAWRFR PAEDTNGRTT YYKDYRRFTL TRDVNTCNLV VGNVGEYHSG TGAKRSGRRK GKKGKKGKRE APVTDFVPAK TQMRLDENAA
301: NADTTAASEP ELVVGEAVND NLPVVESESE FSRGKYLIYM GGGERCKSMN HYVWGFLCAL GEAQYLNRTL VMDLNVCLNS RYTSSGKDEE RDFRLYFDFE
401: HLKQSASVID QSQFWTDWGK WHKKDRLKNH YTEDIKVTPM QLRDVKDTLI MRKFGNVEPD NFWSRVCEGE TEAVIKRPWY LLWKSRRLME IVSAISSRMD
501: WDFDSVHVVR GEKAQNKQLW PNLDRDTSPD SLLTTLNDKV GAGRHLYIAT NEPDKSFFDP MKGKYRTHFL DDFKDLWDEN SEWYTETKEL SNGNAVEFDG
601: YMRVAVDTEV FLRGKRKLET FSDLTRDCKN GVNTCPASS
001: MSGRSAFSRT GGFRPENLGQ NAVSLIGSIG FSVLVIGVVV FTIIAATYEP EDPLFHPSDK ITTFLTSNSN ATLKSDDSIV KTGEDFMAAN QTAFGGFINI
101: ADVETSENDS DGNQLDCDTN IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY KDYRRFVIEK SGNCSVSVMG
201: IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS
301: VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW
401: NLLWKSKRLM EIVSAIASRL NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN PLKDKYKPHF LDEFKDLWDE
501: SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE TFNDLTNDCR DGIGTCNVAA S
101: ADVETSENDS DGNQLDCDTN IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY KDYRRFVIEK SGNCSVSVMG
201: IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS
301: VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW
401: NLLWKSKRLM EIVSAIASRL NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN PLKDKYKPHF LDEFKDLWDE
501: SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE TFNDLTNDCR DGIGTCNVAA S
Arabidopsis Description
At4g12700 [Source:UniProtKB/TrEMBL;Acc:Q9SU16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.