Factsheet for Os07t0633600-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 4
peroxisome 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	golgi, nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

golgi: 25047511

msms PMID: 25047511 doi

Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han

Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G028070.1	Barley	endoplasmic reticulum, plastid	56.41	85.27
Zm00001d022247_P001	Maize	plasma membrane	83.59	84.17
TraesCS2B01G179800.1	Wheat	endoplasmic reticulum, plastid	84.44	84.16
EER99762	Sorghum	cytosol, endoplasmic reticulum, nucleus, plastid	82.39	82.39
TraesCS2A01G154600.1	Wheat	unclear	79.66	80.07
GSMUA_Achr4P00760_001	Banana	golgi, plasma membrane	60.68	63.06
GSMUA_Achr6P01490_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	62.22	62.22
PGSC0003DMT400082037	Potato	endoplasmic reticulum, plasma membrane	56.58	59.86
AT4G08810.1	Thale cress	endoplasmic reticulum, golgi, plastid	56.24	59.6
CDX90695	Canola	endoplasmic reticulum, golgi, plastid	55.56	58.98
VIT_06s0004g00600.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	56.24	58.96
Bra000656.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	55.73	58.63
CDY05025	Canola	endoplasmic reticulum, golgi, plastid	55.56	58.35
KRH58921	Soybean	endoplasmic reticulum	57.09	58.29
KRH42826	Soybean	nucleus	57.09	58.09
Solyc01g005690.2.1	Tomato	plastid	36.58	48.31
Os10t0456400-01	Rice	golgi, mitochondrion	42.22	38.65
Os01t0805100-01	Rice	mitochondrion	20.85	35.88
Os03t0366700-01	Rice	plastid	12.82	18.99

Protein Annotations

MapMan:35.2	EntrezGene:4344012	ProteinID:BAC07112.1	ProteinID:BAC10156.1	ProteinID:BAF22289.1	ProteinID:BAT02796.1
ProteinID:EAZ40781.1	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	GO:GO:0042175	EnsemblPlantsGene:Os07g0633600	EnsemblPlants:Os07t0633600-01	PFAM:PF10250	PANTHER:PTHR31469
PANTHER:PTHR31469:SF2	UniProt:Q8L465	TMHMM:TMhelix	UniParc:UPI000005E701	RefSeq:XP_015647289.1	SEG:seg

Description

Similar to SUB1; calcium ion binding. (Os07t0633600-01);Similar to SUB1 (short under blue light 1). (Os07t0633600-02)

Coordinates

chr7:-:26298359..26300541

Molecular Weight (calculated)

66716.7 Da

IEP (calculated)

8.545

GRAVY (calculated)

-0.588

Length

585 amino acids

Sequence
(BLAST)

001: MSSSDQDDHD EDAPLFRASS GDDDDHPHPR RRSSPVGEVP VAQSIIKAAS NVCFSLFVLA VLVVTVVAVT YQPPDPWLQS SAAITTSLSR VLPNSTFLLP
101: DDSLLPTGED FNSSSSTPSA PRRDDPDQAT ATATAAAVNG TCDPDAPLNC SDPRVLAAVK AFNAKAFFRK SIVFLSYEAP VPGPKPGECD VAWRFRNRRE
201: KSWRRYRDYR RFVLVPGDGC ALDINRVGKF RSGTNAARPP RQKGSKNRNP RVAPPPVDAE INDTIPIVGS EAEFRRGKYL YYMRGGDHCK SMNQFIWSFL
301: CGLGEAKFLN RTFVMDLNMC LSGAHTNNGK DEDGKDFRYY FDFEHLKESV SVVEEGDFLK DWKRWDKKKG PGRISVRKVP SYKVTPMQLK RDKSNIIWRL
401: FDGQEPENYW YRVCEGRAAK VIQRPWYAIW KSKRLMNIVT EIAGRMDWDY DGLHVIRGWK AQNKQMYPNL DADTSPEALV DKVPKLIKQP MRNLYIATNE
501: PFYNYFDKLR SYFHVHLLDD YKELWSNTSE WYNETTTLSG GRPVPFDAYM RVIVDTEVFY RAKTQVETFN NLTRDCKDGI NTCNL

Best Arabidopsis Sequence Match ( AT4G08810.1 )
(BLAST)

001: MKESDLTTEP IAQNLIKLIS NVCFSVFVFT VLIFTVIAVT YQPPDPWLES APALTKLLTE TENATFKIDG SILKTGEDLA SSPSSSPPSN STEQVTEATI
101: EKSEAKIGNM TVKNSIDCDE DLKIVNCSDP RVLVAVERFN LKVFKSIVFL EYETPVNGSK LDECDVSWRF RNKKEKSWRR YRDFRRFRFG FGENCTYKVF
201: HTSGWHSGVN ARRPRISRPS SSRGARGGDS EINDTIPTLG SQTSFRRGKY LYYSRGGDYC KGMNQYMWSF LCGLGEAMYL NRTFVMDLSL CLSSSYSSKG
301: KDEEGKDFRY YFDFEHLKET ASIVEEGEFL RDWKKWNRLH KRKVPVRKVK THRVSPLQLS KDKSTIIWRQ FDTPEPENYW YRVCEGQASK YVERPWHALW
401: KSKRLMNIVS EISGKMDWDF DAVHVVRGEK AKNKKLWPHL DADTWPDAIL TKLKGLVQVW RNLYVATNEP FYNYFDKLRS QYKVHLLDDY SYLWGNKSEW
501: YNETSLLNNG KPVEFDGYMR VAVDTEVFYR GKTRVETFYN LTTDCKDGIN TC

Arabidopsis Description

SUB1SUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWI5]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.