CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16980	Soybean	mitochondrion	95.25	95.25
VIT_12s0057g01310.t01	Wine grape	mitochondrion	78.38	80.07
CDY27873	Canola	mitochondrion	70.3	75.47
Bra015145.1-P	Field mustard	mitochondrion	73.64	74.69
CDY00855	Canola	mitochondrion	73.99	74.51
Solyc07g045210.1.1	Tomato	golgi, mitochondrion	76.1	74.4
AT4G12700.1	Thale cress	mitochondrion	72.94	73.97
PGSC0003DMT400044798	Potato	golgi, mitochondrion	75.57	73.88
PGSC0003DMT400074186	Potato	cytosol, golgi, mitochondrion, plasma membrane	74.69	73.78
Solyc12g006200.1.1	Tomato	golgi, mitochondrion, nucleus, plasma membrane	74.52	73.48
AT2G04280.1	Thale cress	mitochondrion	73.29	73.42
GSMUA_AchrUn_...	Banana	golgi, mitochondrion, plasma membrane	62.39	66.48
GSMUA_AchrUn_...	Banana	plastid	62.57	60.54
TraesCS1D01G141700.1	Wheat	mitochondrion	58.52	53.37
TraesCS1A01G142900.1	Wheat	unclear	58.52	53.37
TraesCS1B01G158900.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	58.7	53.02
Os10t0456400-01	Rice	golgi, mitochondrion	59.23	52.74
Zm00001d032819_P001	Maize	plasma membrane	58.88	52.59
EER94138	Sorghum	mitochondrion	58.52	52.28
KRH58921	Soybean	endoplasmic reticulum	47.1	46.77
KRH42826	Soybean	nucleus	46.75	46.26
Os01t0805100-01	Rice	mitochondrion	26.19	43.82
TraesCS7B01G221300.2	Wheat	golgi	35.15	42.28
TraesCS7A01G320300.1	Wheat	golgi	34.97	42.07
TraesCS7D01G317200.1	Wheat	golgi	34.8	41.86
Zm00001d019764_P001	Maize	golgi, mitochondrion	33.22	41.45
HORVU7Hr1G076590.2	Barley	endoplasmic reticulum, golgi	34.97	40.2
OQU89047	Sorghum	endoplasmic reticulum, golgi, vacuole	32.34	38.49
KRH71696	Soybean	golgi	13.18	19.23
KRH36835	Soybean	endoplasmic reticulum	12.83	18.96

Protein Annotations

EMBL:ACUP02001223	EnsemblPlants:KRH72615	EnsemblPlantsGene:GLYMA_02G223300	EntrezGene:100786274	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR31469	PANTHER:PTHR31469:SF2	ProteinID:KRH72615	ProteinID:KRH72615.1	ProteinID:KRH72616.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002337765	UniProt:I1JH95	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr2:+:41096069..41098740

Molecular Weight (calculated)

64953.3 Da

IEP (calculated)

4.965

GRAVY (calculated)

-0.422

Length

569 amino acids

Sequence
(BLAST)

001: MLGRAAFSRT GSFRPENLGQ NAMAMIGNVC FSFFVFGVLV FTIMAATYEP EDPLFHPSTK ITTFLTSKSN ATFKSDNSVV RTGEDFMAAN ETVFGSIINS
101: TDVDIFASAE ITDAGDAAAA SDCDVSGPID CRDPEVFHLM MRATIEKFQD IHFYRFGKPV RGSNESTCDM AWRFRPKEGK AAAFYKDYRR FVIDRSANCS
201: LSVVSIGEYH TGVNARKRKK HQKAGLEKTP LDMYQANTLP VVGEIVNDSL PVVESESSFS HGKYLLYEGG GDRCKSMNHY LWSFLCALGE AQYLNRTLIM
301: DLSICLSSIY TSSKQDEEGK DFRFYFDFEH LKEAASVLDK EQFWADWNQW QQKDGMSLHL VEDFRVTPMK LMDVKDALIM RKFGSVEPDN YWYRVCEGET
401: ESVVQRPWHL LWKSRRLMDI VSAISSKLNW DYDSVHVVRG EKARNKELWP NLDAHTSPDA LLSTLRDKID EGRNLYIATN EPDTSFFDPL KDKYTTHFLD
501: EYTELWDENS EWYSETTKLN NGIPVEFDGY MRVSIDTEVF FRGKKQLETF NDLTSDCKDG INTCNVAAN

Best Arabidopsis Sequence Match ( AT4G12700.1 )
(BLAST)

001: MSGRSAFSRT GGFRPENLGQ NAVSLIGSIG FSVLVIGVVV FTIIAATYEP EDPLFHPSDK ITTFLTSNSN ATLKSDDSIV KTGEDFMAAN QTAFGGFINI
101: ADVETSENDS DGNQLDCDTN IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY KDYRRFVIEK SGNCSVSVMG
201: IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS
301: VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW
401: NLLWKSKRLM EIVSAIASRL NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN PLKDKYKPHF LDEFKDLWDE
501: SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE TFNDLTNDCR DGIGTCNVAA S

Arabidopsis Description

At4g12700 [Source:UniProtKB/TrEMBL;Acc:Q9SU16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.