Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | golgi, mitochondrion, plasma membrane | 76.19 | 83.9 |
| GSMUA_Achr5P13200_001 | Banana | mitochondrion | 59.35 | 66.22 |
| VIT_12s0057g01310.t01 | Wine grape | mitochondrion | 61.9 | 65.35 |
| KRH72615 | Soybean | mitochondrion | 60.54 | 62.57 |
| KRH16980 | Soybean | mitochondrion | 60.2 | 62.21 |
| GSMUA_Achr1P03280_001 | Banana | mitochondrion | 44.39 | 62.14 |
| CDY27873 | Canola | mitochondrion | 55.1 | 61.13 |
| Solyc07g045210.1.1 | Tomato | golgi, mitochondrion | 60.37 | 61.0 |
| PGSC0003DMT400044798 | Potato | golgi, mitochondrion | 60.37 | 61.0 |
| CDY00855 | Canola | mitochondrion | 58.33 | 60.71 |
| PGSC0003DMT400074186 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 59.18 | 60.42 |
| Solyc12g006200.1.1 | Tomato | golgi, mitochondrion, nucleus, plasma membrane | 59.01 | 60.14 |
| AT4G12700.1 | Thale cress | mitochondrion | 57.14 | 59.89 |
| Bra015145.1-P | Field mustard | mitochondrion | 56.97 | 59.71 |
| AT2G04280.1 | Thale cress | mitochondrion | 57.65 | 59.68 |
| GSMUA_Achr4P00760_001 | Banana | golgi, plasma membrane | 41.84 | 43.69 |
| GSMUA_Achr6P01490_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 42.35 | 42.56 |
| GSMUA_Achr5P27530_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 6.46 | 21.59 |
| GSMUA_Achr5P27540_001 | Banana | cytosol | 6.8 | 13.79 |
| GSMUA_Achr3P09270_001 | Banana | plasma membrane | 15.31 | 13.7 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP07590_001 | EnsemblPlants:GSMUA_AchrUn_randomT07590_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG07590_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR31469 | PANTHER:PTHR31469:SF2 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002962B94 | UniProt:M0U770 |
| MapMan:35.2 | : | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07590_001]
Coordinates
chrchrUn_random:-:32469825..32471883
Molecular Weight (calculated)
65415.9 Da
IEP (calculated)
6.941
GRAVY (calculated)
-0.403
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGRAPLISS TSDPQSLNSI ASLLGPFPSP THSSLGVSRS SGMHNHSPSP LLNRTGSFRA DALGHTALHL VGNLCFALFV VGVLAFSIIA ATYRPDDPLL
101: LPSSPSAASS KITAFLTSST NATFRPDDAP LRTGEDFLNA SSSSASTDDP AAIHLADLPD SNSSSAAATA AGGDSTDCDD AAPINCADPE VFHLMMRATI
201: ESFRDVHFYR FGKPVRGGDG GGSCDMAWRF RPKDAKRAGF YKDYRRFEIT RSRGCVYSIV RIGDYHTGVN ARKKKKPKKG ANDGAGEFAI NKIPISSQAA
301: FSSSRYLIYS GGGDRCKNMN HYLWSFLCAL GEAQYLNRTL VMDLTICLSS KYSSTNQDEE GKDFRFYFDF EHLRDSASVL DQRQFWNDWA LWQKKDKLSL
401: HLVEDLRVTP MKLAKVKGTL IMRKFGAVEP DNYWYRVCEG ETESVIQRPW HLIWKSPRLM DIVSGIASRL KWDFDSVHVA LLSTLRDKIE DGRHLYIATN
501: EPDTSLFDPL KDKYSTHFLD DFKDLWGENS DWYEETKKLN NGIPVEFDGY MRGEVDTEVF LRGKKQLETF NDLTGDCKDG VNTCRTAS
101: LPSSPSAASS KITAFLTSST NATFRPDDAP LRTGEDFLNA SSSSASTDDP AAIHLADLPD SNSSSAAATA AGGDSTDCDD AAPINCADPE VFHLMMRATI
201: ESFRDVHFYR FGKPVRGGDG GGSCDMAWRF RPKDAKRAGF YKDYRRFEIT RSRGCVYSIV RIGDYHTGVN ARKKKKPKKG ANDGAGEFAI NKIPISSQAA
301: FSSSRYLIYS GGGDRCKNMN HYLWSFLCAL GEAQYLNRTL VMDLTICLSS KYSSTNQDEE GKDFRFYFDF EHLRDSASVL DQRQFWNDWA LWQKKDKLSL
401: HLVEDLRVTP MKLAKVKGTL IMRKFGAVEP DNYWYRVCEG ETESVIQRPW HLIWKSPRLM DIVSGIASRL KWDFDSVHVA LLSTLRDKIE DGRHLYIATN
501: EPDTSLFDPL KDKYSTHFLD DFKDLWGENS DWYEETKKLN NGIPVEFDGY MRGEVDTEVF LRGKKQLETF NDLTGDCKDG VNTCRTAS
001: MFGRSAIRGG GFRAENLGQN ALTLIGNIGF SLFVFGVLIF TIIAATYEPE DPLFHPSDKI TTFLTSTSNA TLRSDDSVVK TGEDFMLANQ TAFAEFININ
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS
Arabidopsis Description
At2g04280 [Source:UniProtKB/TrEMBL;Acc:Q9SI07]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.