Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | plastid | 83.9 | 76.19 |
| GSMUA_Achr5P13200_001 | Banana | mitochondrion | 64.42 | 65.28 |
| GSMUA_Achr1P03280_001 | Banana | mitochondrion | 51.31 | 65.24 |
| VIT_12s0057g01310.t01 | Wine grape | mitochondrion | 67.04 | 64.27 |
| KRH72615 | Soybean | mitochondrion | 66.48 | 62.39 |
| KRH16980 | Soybean | mitochondrion | 66.1 | 62.04 |
| Solyc07g045210.1.1 | Tomato | golgi, mitochondrion | 66.85 | 61.34 |
| PGSC0003DMT400044798 | Potato | golgi, mitochondrion | 66.85 | 61.34 |
| CDY27873 | Canola | mitochondrion | 60.86 | 61.32 |
| PGSC0003DMT400074186 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 65.17 | 60.42 |
| Solyc12g006200.1.1 | Tomato | golgi, mitochondrion, nucleus, plasma membrane | 64.79 | 59.97 |
| Bra015145.1-P | Field mustard | mitochondrion | 62.73 | 59.71 |
| CDY00855 | Canola | mitochondrion | 62.92 | 59.47 |
| AT2G04280.1 | Thale cress | mitochondrion | 62.92 | 59.15 |
| AT4G12700.1 | Thale cress | mitochondrion | 61.98 | 59.0 |
| GSMUA_Achr4P00760_001 | Banana | golgi, plasma membrane | 45.32 | 42.98 |
| GSMUA_Achr6P01490_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 46.25 | 42.22 |
| GSMUA_Achr5P27530_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 6.18 | 18.75 |
| GSMUA_Achr5P27540_001 | Banana | cytosol | 7.87 | 14.48 |
| GSMUA_Achr3P09270_001 | Banana | plasma membrane | 17.42 | 14.16 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP19670_001 | EnsemblPlants:GSMUA_AchrUn_randomT19670_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG19670_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR31469 | PANTHER:PTHR31469:SF2 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002956944 | UniProt:M0UAM6 |
| MapMan:35.2 | : | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19670_001]
Coordinates
chrchrUn_random:+:94777275..94779164
Molecular Weight (calculated)
60621.0 Da
IEP (calculated)
6.512
GRAVY (calculated)
-0.484
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MHDNSRSLLL NRTGSFRAET LGQTALFVVG NLCFALFVVG VLAFTIIAAT YRADDPLLLP PSSSASSAKL TAFLTSSTNA TFRPDDAPLR TGEDFLNSST
101: SSASPDDAAV IHLADLPNSN SSSSAASGGT DCDAAAPINC ADPDVFHLMM RATIESFRDV HFYRFGKPVR GGDGGGSCDM AWRFHPKDAK RAGFYKDYRR
201: FEIARSPSCT YSIVKIGDYH TGVNARKKKK QRKGDHDATG EFSESKFSSS RYLIYSGGGD RCKSMNHYLW SFLCALGEAQ YLNRTLVMDL TVCLSSKYST
301: TNQDEEGKDF RFYFDFEHLR DSASVLDQRQ FWNDWALWQK KDRLSLHLVE DFRVTPMKLT MVKDTLIMRK FGAVEPDNYW YRVCEGETES VIQRPWHLLW
401: KSRRLMDIVS GIASRLNWDF DSVHVALLST LRDKIEDRRH LYIATEESDT SFFDPLKEKY TTHFLDDFKD LWDKNSEWYD ETKKLNNGIP VEFDGYMRGE
501: VDTEVFLRAK KQLETFNDLT GDCKDGGNTC RSTS
101: SSASPDDAAV IHLADLPNSN SSSSAASGGT DCDAAAPINC ADPDVFHLMM RATIESFRDV HFYRFGKPVR GGDGGGSCDM AWRFHPKDAK RAGFYKDYRR
201: FEIARSPSCT YSIVKIGDYH TGVNARKKKK QRKGDHDATG EFSESKFSSS RYLIYSGGGD RCKSMNHYLW SFLCALGEAQ YLNRTLVMDL TVCLSSKYST
301: TNQDEEGKDF RFYFDFEHLR DSASVLDQRQ FWNDWALWQK KDRLSLHLVE DFRVTPMKLT MVKDTLIMRK FGAVEPDNYW YRVCEGETES VIQRPWHLLW
401: KSRRLMDIVS GIASRLNWDF DSVHVALLST LRDKIEDRRH LYIATEESDT SFFDPLKEKY TTHFLDDFKD LWDKNSEWYD ETKKLNNGIP VEFDGYMRGE
501: VDTEVFLRAK KQLETFNDLT GDCKDGGNTC RSTS
001: MFGRSAIRGG GFRAENLGQN ALTLIGNIGF SLFVFGVLIF TIIAATYEPE DPLFHPSDKI TTFLTSTSNA TLRSDDSVVK TGEDFMLANQ TAFAEFININ
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS
Arabidopsis Description
At2g04280 [Source:UniProtKB/TrEMBL;Acc:Q9SI07]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.