Factsheet for TraesCS7D01G317200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G320300.1	Wheat	golgi	98.73	98.73
TraesCS7B01G221300.2	Wheat	golgi	97.25	97.25
HORVU7Hr1G076590.2	Barley	endoplasmic reticulum, golgi	93.87	89.7
Os01t0805100-01	Rice	mitochondrion	51.59	71.76
Zm00001d019764_P001	Maize	golgi, mitochondrion	68.71	71.27
OQU89047	Sorghum	endoplasmic reticulum, golgi, vacuole	68.5	67.78
CDY27873	Canola	mitochondrion	40.8	36.42
CDY00855	Canola	mitochondrion	42.07	35.22
KRH16980	Soybean	mitochondrion	42.28	35.15
Bra015145.1-P	Field mustard	mitochondrion	41.65	35.12
VIT_12s0057g01310.t01	Wine grape	mitochondrion	41.23	35.01
PGSC0003DMT400074186	Potato	cytosol, golgi, mitochondrion, plasma membrane	42.49	34.9
KRH72615	Soybean	mitochondrion	41.86	34.8
AT4G12700.1	Thale cress	mitochondrion	41.23	34.76
Solyc07g045210.1.1	Tomato	golgi, mitochondrion	42.71	34.71
Solyc12g006200.1.1	Tomato	golgi, mitochondrion, nucleus, plasma membrane	42.28	34.66
PGSC0003DMT400044798	Potato	golgi, mitochondrion	42.49	34.54
AT2G04280.1	Thale cress	mitochondrion	41.44	34.51
TraesCS1D01G141700.1	Wheat	mitochondrion	41.86	31.73
TraesCS2D01G151100.1	Wheat	mitochondrion	13.11	15.82

Protein Annotations

EnsemblPlants:TraesCS7D01G317200.1	EnsemblPlantsGene:TraesCS7D01G317200	PANTHER:PTHR31469	PANTHER:PTHR31469:SF7	SEG:seg	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:403765032..403766453

Molecular Weight (calculated)

52820.2 Da

IEP (calculated)

7.631

GRAVY (calculated)

-0.277

Length

473 amino acids

Sequence
(BLAST)

001: MDPSRPLLGR GAFLSSSAHA AAAIILIAFL LLTLLRLPLS PSISIYTPPP LASTPHHHLQ HQDHEDQEQE DASSCDLSSP LDCADPRLFH LMMRSAIDAF
101: PAVHFARFGR PVPGDPPSAS CDMAWRARTN ASASASPTAT TKDYRRFAIA RDPHTCAYSV TSIGDYHSGP NARKPRPGAS NATAAPPPPP LSRSQFAAAT
201: YLSYHGGGDR CKLMPHYMRS LLCALAEARY LNRTLVLDLS LCLAASYTAA GMPEEGKRLA FYFDIDHLRS SVVNIIEERQ FWEDWDRWGA QGQLGLRLIE
301: DTRVAATKFS KAKDTLIVRK FGEVEPGNYW YHVCEGEAER VLPPPRHAIR LAPSLMSIVD DIILSMQQDF DSVHVGGSVE DLIQRIEDGV DVGRQVYIAG
401: EGINTVSMEV LKAKYNNLRY LDEFQRLWRK DSKWFLEMKR LNGGVPVKFD GYMRELVDRE VFLKGKKKVE VLR

Best Arabidopsis Sequence Match ( AT2G04280.1 )
(BLAST)

001: MFGRSAIRGG GFRAENLGQN ALTLIGNIGF SLFVFGVLIF TIIAATYEPE DPLFHPSDKI TTFLTSTSNA TLRSDDSVVK TGEDFMLANQ TAFAEFININ
101: DVEASTNETT TEEEGNKLEC DVNTPIDCKD QQVFHLMMRA TIDKFKDIHF YKFGKPVTGE EGVNSCDMAW RYRPRDGKSA AFYKDYRRFV VAKSENCSVS
201: VVGIGEYHSG LNARKRKKNQ KAGFEKTGGK KDDFSLPVVG ELVNDSLPMV ESDSVFKTGK YLVYVGGGDR CKSMNHFLWS FLCALGEAQY LNRTLVMDLT
301: LCLSSIYTSS GQNEEGKDFR FYFDFEHLKE AASVLDEAQF WAQWGKLRKK RRNRLNLHLV EDFRVTPMKL AAVKDTLIMR KFGSVEPDNY WYRVCEGDAE
401: SVVKRPWHLL WKSRRLMEIV SAIASRLNWD YDAVHIERGE KARNKEVWPN LEADTSPSAL LSTLQDKVEE GRHLYIATNE GELSFFNPLK DKYATHFLYD
501: YKDLWDESSE WYSETTKLNG GNPVEFDGYM RASVDTEVFL RGKKQIETFN DLTNDCKDGV GTCNAATS

Arabidopsis Description

At2g04280 [Source:UniProtKB/TrEMBL;Acc:Q9SI07]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.