Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004819_P001 | Maize | mitochondrion | 92.13 | 41.05 |
| Zm00001d016377_P001 | Maize | nucleus | 44.09 | 38.89 |
| GSMUA_Achr5P27540_001 | Banana | cytosol | 71.65 | 31.38 |
| EER94809 | Sorghum | mitochondrion | 85.83 | 27.81 |
| Os03t0366700-01 | Rice | plastid | 84.25 | 27.09 |
| Zm00001d006931_P002 | Maize | plasma membrane | 81.1 | 25.88 |
| KRH36835 | Soybean | endoplasmic reticulum | 74.02 | 24.42 |
| Zm00001d029266_P002 | Maize | mitochondrion | 90.55 | 24.31 |
| KRH71696 | Soybean | golgi | 73.23 | 23.85 |
| Solyc10g078400.1.1 | Tomato | golgi | 74.8 | 23.75 |
| AT2G41150.2 | Thale cress | endoplasmic reticulum, golgi | 74.02 | 23.27 |
| PGSC0003DMT400021597 | Potato | golgi | 73.23 | 23.08 |
| Bra004601.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 70.87 | 22.78 |
| AT3G56750.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 71.65 | 22.58 |
| CDY51258 | Canola | endoplasmic reticulum, golgi, mitochondrion | 71.65 | 22.58 |
| CDX67655 | Canola | endoplasmic reticulum, golgi, mitochondrion | 71.65 | 22.58 |
| CDX79955 | Canola | endoplasmic reticulum, golgi, mitochondrion | 70.87 | 22.5 |
| VIT_08s0040g01260.t01 | Wine grape | golgi | 70.08 | 22.36 |
| CDY65073 | Canola | endoplasmic reticulum, golgi | 70.87 | 22.33 |
| Bra007268.1-P | Field mustard | golgi | 70.87 | 22.33 |
| CDY23872 | Canola | endoplasmic reticulum, golgi, mitochondrion | 70.08 | 22.31 |
| Bra003250.1-P | Field mustard | golgi | 73.23 | 22.3 |
| CDY27198 | Canola | endoplasmic reticulum, golgi, mitochondrion | 70.08 | 21.92 |
| Zm00001d022294_P002 | Maize | plastid | 26.77 | 20.24 |
| GSMUA_Achr3P09270_001 | Banana | plasma membrane | 71.65 | 13.85 |
| Zm00001d032819_P001 | Maize | plasma membrane | 25.98 | 5.18 |
| Zm00001d022247_P001 | Maize | plasma membrane | 22.83 | 4.99 |
| Zm00001d006021_P001 | Maize | cytosol | 2.36 | 4.55 |
| Zm00001d019764_P001 | Maize | golgi, mitochondrion | 13.39 | 3.73 |
Protein Annotations
| EnsemblPlants:Zm00001d010457_P001 | EnsemblPlants:Zm00001d010457_T001 | EnsemblPlantsGene:Zm00001d010457 | Gene3D:3.40.50.11350 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005975 | GO:GO:0006004 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | GO:GO:0016757 |
| InterPro:GDP-Fuc_O-FucTrfase | PANTHER:PTHR31469 | PANTHER:PTHR31469:SF12 | PFAM:PF10250 | ProteinID:AQK94094.1 | UniParc:UPI0008451054 |
| UniProt:A0A1D6FR54 | MapMan:35.2 | : | : | : | : |
Description
calcium ion binding
Coordinates
chr8:+:116068700..116069586
Molecular Weight (calculated)
14871.2 Da
IEP (calculated)
10.158
GRAVY (calculated)
-0.323
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEILGDYDA IHVRRGDLLK NRKDRFGIER SLHPHLDRDT RPEYIIKRIA QWIPPGRTLF IASNERTPGF FSPLSDRYKL AYSSNFSSIL EPIIENNYRL
101: FMVERLMMQG AKTFIKTILA ELTLLAT
101: FMVERLMMQG AKTFIKTILA ELTLLAT
001: MATMSKPHKL KATPGSQRLV LLCIVAVAFL LLFTSVISTG GLALPYRTTL IGYFVRSTRN KTQHSLSDKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSRMCIN PIHNKKGILN RSNNETREES WEVSSCAMES LYDIDLISEK IPVILDDSET WHIMLSTSMK LKERGSAHVY GANRHELNDS
201: SDFTNLLLIN RTASPLAWFV ECKDRGNRSD VMLPYSFLQT MAASRLRDAA EKIKAKLGDY DAIHVRRGDK LKTRKDRFRV ERSQFPHLDR DTRPEFIIGR
301: IQKQIPPGRT LFIGSNERTP DFFSPLAIRY KVAYSSNFSE ILDPIIENNY QLFMVERLIM MGAKTFFKTF REYETDLTLT DDPKKNKNWE IPVYTMDEGK
401: EAAS
101: LEEAMFLNRT FVMPSRMCIN PIHNKKGILN RSNNETREES WEVSSCAMES LYDIDLISEK IPVILDDSET WHIMLSTSMK LKERGSAHVY GANRHELNDS
201: SDFTNLLLIN RTASPLAWFV ECKDRGNRSD VMLPYSFLQT MAASRLRDAA EKIKAKLGDY DAIHVRRGDK LKTRKDRFRV ERSQFPHLDR DTRPEFIIGR
301: IQKQIPPGRT LFIGSNERTP DFFSPLAIRY KVAYSSNFSE ILDPIIENNY QLFMVERLIM MGAKTFFKTF REYETDLTLT DDPKKNKNWE IPVYTMDEGK
401: EAAS
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hit /.../7 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). [Source:TAIR;Acc:AT2G41150]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.