Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010457_P001 | Maize | cytosol | 41.05 | 92.13 |
| Zm00001d016377_P001 | Maize | nucleus | 21.4 | 42.36 |
| GSMUA_Achr5P27540_001 | Banana | cytosol | 41.4 | 40.69 |
| EER94809 | Sorghum | mitochondrion | 51.23 | 37.24 |
| Os03t0366700-01 | Rice | plastid | 50.53 | 36.46 |
| Zm00001d006931_P002 | Maize | plasma membrane | 49.12 | 35.18 |
| KRH36835 | Soybean | endoplasmic reticulum | 44.21 | 32.73 |
| KRH71696 | Soybean | golgi | 43.86 | 32.05 |
| Zm00001d029266_P002 | Maize | mitochondrion | 52.98 | 31.92 |
| Solyc10g078400.1.1 | Tomato | golgi | 44.56 | 31.75 |
| Zm00001d022294_P002 | Maize | plastid | 18.6 | 31.55 |
| PGSC0003DMT400021597 | Potato | golgi | 44.56 | 31.51 |
| AT2G41150.2 | Thale cress | endoplasmic reticulum, golgi | 44.21 | 31.19 |
| Bra004601.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 42.46 | 30.63 |
| CDX79955 | Canola | endoplasmic reticulum, golgi, mitochondrion | 42.81 | 30.5 |
| CDY23872 | Canola | endoplasmic reticulum, golgi, mitochondrion | 42.46 | 30.33 |
| AT3G56750.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 42.11 | 29.78 |
| CDY65073 | Canola | endoplasmic reticulum, golgi | 42.11 | 29.78 |
| Bra007268.1-P | Field mustard | golgi | 42.11 | 29.78 |
| CDY51258 | Canola | endoplasmic reticulum, golgi, mitochondrion | 41.75 | 29.53 |
| CDX67655 | Canola | endoplasmic reticulum, golgi, mitochondrion | 41.75 | 29.53 |
| CDY27198 | Canola | endoplasmic reticulum, golgi, mitochondrion | 41.75 | 29.31 |
| VIT_08s0040g01260.t01 | Wine grape | golgi | 40.7 | 29.15 |
| Bra003250.1-P | Field mustard | golgi | 41.75 | 28.54 |
| GSMUA_Achr3P09270_001 | Banana | plasma membrane | 41.4 | 17.96 |
| Zm00001d032819_P001 | Maize | plasma membrane | 18.95 | 8.48 |
| Zm00001d022247_P001 | Maize | plasma membrane | 16.49 | 8.09 |
| Zm00001d019764_P001 | Maize | golgi, mitochondrion | 12.28 | 7.68 |
| Zm00001d006021_P001 | Maize | cytosol | 1.75 | 7.58 |
Protein Annotations
| Gene3D:3.40.50.11350 | MapMan:35.1 | UniProt:A0A1D6EHN5 | InterPro:FYrich_C | InterPro:GDP-Fuc_O-FucTrfase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005975 |
| GO:GO:0006004 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | GO:GO:0016757 | InterPro:IPR003889 |
| ProteinID:ONM19637.1 | PFAM:PF05965 | PFAM:PF10250 | PANTHER:PTHR31469 | PANTHER:PTHR31469:SF12 | UniParc:UPI000843284B |
| EnsemblPlantsGene:Zm00001d004819 | EnsemblPlants:Zm00001d004819_P001 | EnsemblPlants:Zm00001d004819_T001 | SEG:seg | : | : |
Description
calcium ion binding
Coordinates
chr2:-:141044586..141048265
Molecular Weight (calculated)
33153.9 Da
IEP (calculated)
9.607
GRAVY (calculated)
-0.673
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSLSFAAAR RRRSAGPEKA RAEQRGYPEE SPAEEGLHPA ARDKPHEAVA GSQLELELQR ARQQVTIENY PGEIFINISP TKCWNMVRER LNMEIRRQLN
101: MGRDNLPTLQ PTWFVKGSIW EVMAMKCYDA APKSVPPFQM KEILGDYDAI HVRRGDLLKN RKDRFGIERS LHPHLDRDTR PEYIIKRIAQ WIPPGRTLFI
201: ASNERTPGFF SPLSDRYKLA YSSNFSSILE PIIENNYKLF MVERLMMQGA KTFIKTMREF DSDLTLCDDP KKNTKVWQKP VYTDD
101: MGRDNLPTLQ PTWFVKGSIW EVMAMKCYDA APKSVPPFQM KEILGDYDAI HVRRGDLLKN RKDRFGIERS LHPHLDRDTR PEYIIKRIAQ WIPPGRTLFI
201: ASNERTPGFF SPLSDRYKLA YSSNFSSILE PIIENNYKLF MVERLMMQGA KTFIKTMREF DSDLTLCDDP KKNTKVWQKP VYTDD
001: MATMSKPHKL KATPGSQRLV LLCIVAVAFL LLFTSVISTG GLALPYRTTL IGYFVRSTRN KTQHSLSDKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSRMCIN PIHNKKGILN RSNNETREES WEVSSCAMES LYDIDLISEK IPVILDDSET WHIMLSTSMK LKERGSAHVY GANRHELNDS
201: SDFTNLLLIN RTASPLAWFV ECKDRGNRSD VMLPYSFLQT MAASRLRDAA EKIKAKLGDY DAIHVRRGDK LKTRKDRFRV ERSQFPHLDR DTRPEFIIGR
301: IQKQIPPGRT LFIGSNERTP DFFSPLAIRY KVAYSSNFSE ILDPIIENNY QLFMVERLIM MGAKTFFKTF REYETDLTLT DDPKKNKNWE IPVYTMDEGK
401: EAAS
101: LEEAMFLNRT FVMPSRMCIN PIHNKKGILN RSNNETREES WEVSSCAMES LYDIDLISEK IPVILDDSET WHIMLSTSMK LKERGSAHVY GANRHELNDS
201: SDFTNLLLIN RTASPLAWFV ECKDRGNRSD VMLPYSFLQT MAASRLRDAA EKIKAKLGDY DAIHVRRGDK LKTRKDRFRV ERSQFPHLDR DTRPEFIIGR
301: IQKQIPPGRT LFIGSNERTP DFFSPLAIRY KVAYSSNFSE ILDPIIENNY QLFMVERLIM MGAKTFFKTF REYETDLTLT DDPKKNKNWE IPVYTMDEGK
401: EAAS
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hit /.../7 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). [Source:TAIR;Acc:AT2G41150]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.